RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 TMEM126BQ8IUX1 230 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 MFSD6LQ8IWD5 586 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 SLC34A3Q8N130 599 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 LGI3Q8N145 548 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 LRRC52Q8N7C0 313 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 FAM98AQ8NCA5 519 aaKnown RBP4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR2T11Q8NH01 316 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR51F2Q8NH61 342 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 NUDCD2Q8WVJ2 157 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 ASB17Q8WXJ9 295 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 GLYATL1Q969I3 302 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 ISOC1Q96CN7 298 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 PABPC5Q96DU9 382 aaKnown RBP4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 TMEM19Q96HH6 336 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 C16orf92Q96LL3 132 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 TNFRSF13CQ96RJ3 184 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 C20orf24Q9BUV8 137 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 ST6GALNAC5Q9BVH7 336 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 ELOVL1Q9BW60 279 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 OSBPL11Q9BXB4 747 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 C1QTNF1Q9BXJ1 281 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 PCDHAC1Q9H158 963 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 TLNRD1Q9H1K6 362 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 R3HDMLQ9H3Y0 253 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 REEP4Q9H6H4 257 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 TMEM231Q9H6L2 316 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 ZMAT4Q9H898 229 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 SRD5A3Q9H8P0 318 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 CALHM2Q9HA72 323 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 EFCAB1Q9HAE3 211 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 WFDC1Q9HC57 220 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 SLC2A9Q9NRM0 540 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 SLC22A11Q9NSA0 550 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 NECAP2Q9NVZ3 263 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 PTTG3PQ9NZH4 202 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 TMEM181Q9P2C4 612 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 SEC14L4Q9UDX3 406 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 KLQ9UEF7 1012 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 KIF25Q9UIL4 384 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 GNG8Q9UK08 70 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 USP22Q9UPT9 525 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 PIGLQ9Y2B2 252 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 TMEM184BQ9Y519 407 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 PCDHA13Q9Y5I0 950 aa4.3□□□□□ -1.72
HMGB3P9-201ENST00000441799 CRYBG1Q9Y4K1 1723 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 CNTNAP1P78357 1384 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 PALLDQ8WX93 1383 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 NEDD4P46934 1319 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TRAV8-7A0A075B6U6 113 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TRBV11-1A0A0K0K1C0 115 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 KLF18A0A0U1RQI7 1052 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 hCG_38984A0A1B0GV85 526 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 RPS10-NUDT3A0A1W2PQS6 291 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SLC22A23A1A5C7 686 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SMCO3A2RU48 225 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 A8MXK9 166 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 E9PQ18 207 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 BLOC1S5-TXNDC5H3BN57 136 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 CLDN34H7C241 214 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 H7C417 338 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 M0R143 59 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 CLIC1O00299 241 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SLC28A1O00337 649 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 RS1O15537 224 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TEX33O43247 280 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 HOXA3O43365 443 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TGOLN2O43493 480 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 XRCC2O43543 280 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TPST1O60507 370 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 FKBP6O75344 327 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 C1QCP02747 245 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR10J4P0C629 311 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR8U8P0C7N1 319 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 PET100P0DJ07 73 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 FCGR2AP12318 317 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TPSB2P20231 275 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 C4BPBP20851 252 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 CD82P27701 267 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SLC6A4P31645 630 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 GGT2P36268 569 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 CFHR2P36980 270 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TTPAP49638 278 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 GZMKP49863 264 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 CDKN2DP55273 166 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 RAB5BP61020 215 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 ABCE1P61221 599 aaKnown RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 ERVK11-1P61568 191 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 UFM1P61960 85 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SHC2P98077 582 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 MS4A2Q01362 244 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SRSF1Q07955 248 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 MAD2L1Q13257 205 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 GAB1Q13480 694 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 IL10RAQ13651 578 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 PRPSAP1Q14558 356 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 ELAVL3Q14576 367 aaKnown RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TPSAB1Q15661 275 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 UGT8Q16880 541 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SPDYE7PQ495Y7 208 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 KHDC1Q4VXA5 237 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms