RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 SNAP29O95721 258 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 DBIP07108 87 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 H1F0P07305 194 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 GP1BAP07359 652 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 HEXBP07686 556 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 PABPC4LP0CB38 370 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 NPIPA8P0DM63 369 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 TFPIP10646 304 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 DAOP14920 347 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 HPGDP15428 266 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 IL7RP16871 459 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF26P17031 533 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 ACP1P24666 158 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 IL12BP29460 328 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 DCTDP32321 178 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 GABRA3P34903 492 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 KRT20P35900 424 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 DCTP40126 519 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 UGT2B15P54855 530 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 PSMD4P55036 377 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 SMIM11AP58511 58 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 BTG2P78543 158 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 IGLV3-21P80748 117 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 PPP2R2BQ00005 443 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 MERTKQ12866 999 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 FOXD4Q12950 439 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 PPP1R8Q12972 351 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 SNTA1Q13424 505 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 GK3PQ14409 553 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 GPR68Q15743 365 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 NNATQ16517 81 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 EXOC3L2Q2M3D2 409 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 TMEM95Q3KNT9 176 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 ARHGAP11BQ3KRB8 267 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 TRMT12Q53H54 448 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 DCST1Q5T197 706 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 CCNJQ5T5M9 372 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 FHL5Q5TD97 284 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 TTC23Q5W5X9 447 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 FAAH2Q6GMR7 532 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 WBP2NLQ6ICG8 309 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 RHBDD2Q6NTF9 364 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 TMEM154Q6P9G4 183 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF836Q6ZNA1 936 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 FRRS1Q6ZNA5 592 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 OLIG3Q7RTU3 272 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 PIWIL3Q7Z3Z3 882 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 GALNT5Q7Z7M9 940 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 RANBP3LQ86VV4 465 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 VRK2Q86Y07 508 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 LURAP1LQ8IV03 231 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 NAXDQ8IW45 347 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 CHERPQ8IWX8 916 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 OFCC1Q8IZS5 231 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 HS3ST5Q8IZT8 346 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 C8orf59Q8N0T1 100 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 MARVELD2Q8N4S9 558 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 CHDHQ8NE62 594 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR7G1Q8NGA0 311 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR10G2Q8NGC3 310 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR4N2Q8NGD1 307 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 METTL21AQ8WXB1 218 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 PIK3R3Q92569 461 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 DAZLQ92904 295 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 TSLPQ969D9 159 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 RNF183Q96D59 192 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 RNFT2Q96EX2 444 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 GIMAP5Q96F15 307 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 NRBF2Q96F24 287 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 PRRC1Q96M27 445 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 GAL3ST4Q96RP7 486 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 PIP5K1AQ99755 562 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC29A1Q99808 456 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 LMF2Q9BU23 707 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 FNDC11Q9BVV2 318 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR8D2Q9GZM6 311 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC38A1Q9H2H9 487 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 CXorf21Q9HAI6 301 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 NTN4Q9HB63 628 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 TMEM9BQ9NQ34 198 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 PNPLA3Q9NST1 481 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 VNN3Q9NY84 501 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 USE1Q9NZ43 259 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 C19orf25Q9UFG5 118 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 MRTO4Q9UKD2 239 aaKnown RBP3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 MKLN1Q9UL63 735 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 POFUT2Q9Y2G5 429 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 IFT52Q9Y366 437 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 LYVE1Q9Y5Y7 322 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 CLCA3PQ9Y6N3 262 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 U3KQA8 63 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 KIF26BQ2KJY2 2108 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 DSPPQ9NZW4 1301 aa3.44□□□□□ -1.86
HMGB3P20-201ENST00000417997 LAMA3Q16787 3333 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 IGLV5-37A0A075B6J1 123 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 CPSF4LA6NMK7 179 aaKnown RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 H0YAE9 185 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 H3BMH7 237 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 TMX2-CTNND1H3BSU7 103 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 NTN3O00634 580 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms