RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 CRYAAP02489 173 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 BGLAPP02818 100 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 IFNW1P05000 195 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 TSPAN19P0C672 248 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 HSD17B1P14061 328 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 CD99P14209 185 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 CBR1P16152 277 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 DRD4P21917 467 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 HTR2AP28223 471 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 LOXP28300 417 aaPredicted RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 AQP1P29972 269 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 GRPRP30550 384 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 APOBEC3AP31941 199 aaPredicted RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 CCKARP32238 428 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 SLC9A3P48764 834 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 RNF144AP50876 292 aaPredicted RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 DSCR9P59020 149 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 TAS2R41P59536 307 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 UBE2NP61088 152 aaKnown RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 RPS4XP62701 263 aaKnown RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 NKX6-1P78426 367 aaPredicted RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 LIPEQ05469 1076 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 BNIP2Q12982 314 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 SNTB1Q13884 538 aaKnown RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 KRT72Q14CN4 511 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 TRAM2Q15035 370 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 ZNF74Q16587 644 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 FXNQ16595 210 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 ZNF672Q499Z4 452 aaPredicted RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 GLIPR1L2Q4G1C9 344 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 CYBRD1Q53TN4 286 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 RABL3Q5HYI8 236 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 SAMD4BQ5PRF9 694 aaKnown RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 TSPO2Q5TGU0 170 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 AGAP6Q5VW22 663 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 FAM205BPQ63HN1 556 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 ANKRD34AQ69YU3 496 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 C16orf89Q6UX73 402 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 UNQ6126/PRO20091Q6UXV3 157 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 NHLRC1Q6VVB1 395 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 FKBP9P1Q75LS8 142 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 CBLL1Q75N03 491 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 HMGN2P46Q86SG4 172 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 CARM1Q86X55 608 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 WFDC8Q8IUA0 241 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 P3H2Q8IVL5 708 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 C10orf111Q8N326 155 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 LINC00471Q8N535 108 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 SMYD1Q8NB12 490 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 OR4F15Q8NGB8 312 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 RNF217Q8TC41 542 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 IGFBPL1Q8WX77 278 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 GEMIN6Q8WXD5 167 aaKnown RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 NANOS1Q8WY41 292 aaKnown RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 BCL2L2Q92843 193 aaPredicted RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 TAMM41Q96BW9 452 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 RCN3Q96D15 328 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 SLC25A44Q96H78 314 aaPredicted RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 ZC3HAV1LQ96H79 300 aaKnown RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 CCL19Q99731 98 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 KCNS3Q9BQ31 491 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 KATNB1Q9BVA0 655 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 FNDC11Q9BVV2 318 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 MUC13Q9H3R2 512 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 C1orf198Q9H425 327 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 SMURF2Q9HAU4 748 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 CISD1Q9NZ45 108 aaKnown RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 CRNNQ9UBG3 495 aaPredicted RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 ITGB1BP2Q9UKP3 347 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 FAM32AQ9Y421 112 aaKnown RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 SPEF1Q9Y4P9 236 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 PMF1-BGLAPU3KQ54 211 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 MAST4O15021 2626 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 ANKRD17O75179 2603 aaKnown RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 TACC2O95359 2948 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 IGKV1D-42A0A075B6H8 117 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 A0A1W2PRG6 482 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 SLC22A23A1A5C7 686 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 DPRXA6NFQ7 191 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 CPSF4LA6NMK7 179 aaKnown RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 ZNF99A8MXY4 864 aaPredicted RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 M0R082 166 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 OVOL3O00110 214 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 CXCR6O00574 342 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 FARS2O95363 451 aaKnown RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 FAM107AO95990 144 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 BCL10O95999 233 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 ITGA5P08648 1049 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 ASAH2BP0C7U1 165 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 DANCRP0C864 163 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 ADORA3P0DMS8 318 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 RHCEP18577 417 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 FUT1P19526 365 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 NPR2P20594 1047 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 TUBG1P23258 451 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 AHCYP23526 432 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 CD40P25942 277 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 NTF4P34130 210 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 GUCA1AP43080 201 aaPredicted RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 EVX1P49640 407 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms