RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TRAF3IP2O43734 574 aaPredicted RBP15.48■□□□□ 0.07
LSM5-204ENST00000409909 NPPAP01160 153 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 HLA-DOBP13765 273 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 MDH1P40925 334 aaKnown RBP15.48■□□□□ 0.07
LSM5-204ENST00000409909 C1DQ13901 141 aaKnown RBP15.48■□□□□ 0.07
LSM5-204ENST00000409909 TBRG1Q3YBR2 411 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 HSP90B2PQ58FF3 399 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 INTS11Q5TA45 600 aaKnown RBP15.48■□□□□ 0.07
LSM5-204ENST00000409909 B3GLCTQ6Y288 498 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 DTX2Q86UW9 622 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 WDFY1Q8IWB7 410 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 ADPRHL1Q8NDY3 354 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 C10orf82Q8WW14 230 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 BCL2L2Q92843 193 aaPredicted RBP15.48■□□□□ 0.07
LSM5-204ENST00000409909 OR2M2Q96R28 347 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 EPYCQ99645 322 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 SH3GL1Q99961 368 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 ECSITQ9BQ95 431 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 MED4Q9NPJ6 270 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 ARMCX1Q9P291 453 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 CHP2O43745 196 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 ROR2Q01974 943 aaKnown RBP15.47■□□□□ 0.07
LSM5-204ENST00000409909 MFSD13AQ14CX5 517 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 MAPRE2Q15555 327 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 C1QTNF12Q5T7M4 302 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 Q71RC1 249 aaPredicted RBP15.47■□□□□ 0.07
LSM5-204ENST00000409909 TMEM123Q8N131 208 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 SCAIQ8N9R8 606 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 SLC26A7Q8TE54 656 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 ADAMTS16Q8TE57 1224 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 GTPBP3Q969Y2 492 aaKnown RBP15.47■□□□□ 0.07
LSM5-204ENST00000409909 ZNF837Q96EG3 531 aaPredicted RBP15.47■□□□□ 0.07
LSM5-204ENST00000409909 BDH2Q9BUT1 245 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 GRIP2Q9C0E4 1043 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 PCDHAC1Q9H158 963 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 NELFAQ9H3P2 528 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 MRPL39Q9NYK5 338 aaKnown RBP15.47■□□□□ 0.07
LSM5-204ENST00000409909 CORINQ9Y5Q5 1042 aa15.47■□□□□ 0.07
LSM5-204ENST00000409909 A0A096LPE4 126 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 A0A1W2PPZ6 126 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 RPL36A-HNRNPH2H7BZ11 118 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 PLPP3O14495 311 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 SMAD7O15105 426 aaKnown RBP15.46■□□□□ 0.07
LSM5-204ENST00000409909 NDUFS7O75251 213 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 SLC43A1O75387 559 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 WNT11O96014 354 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 NQO1P15559 274 aaKnown RBP15.46■□□□□ 0.07
LSM5-204ENST00000409909 ARF1P84077 181 aaKnown RBP15.46■□□□□ 0.07
LSM5-204ENST00000409909 IL1RL1Q01638 556 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 PMS2P3Q13401 168 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 PHYHD1Q5SRE7 291 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 HMBOX1Q6NT76 420 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 C10orf53Q8N6V4 93 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 POU5F2Q8N7G0 328 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 TXNDC15Q96J42 360 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 DHRS9Q9BPW9 319 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 ASPNQ9BXN1 380 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 GPR35Q9HC97 309 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 FAIMQ9NVQ4 179 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 POU2F3Q9UKI9 436 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 SLC7A7Q9UM01 511 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 CAPN7Q9Y6W3 813 aa15.46■□□□□ 0.07
LSM5-204ENST00000409909 NAV3Q8IVL0 2385 aa15.46■□□□□ 0.06
LSM5-204ENST00000409909 TRAPPC13A5PLN9 417 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 LY6G6DO95868 133 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 IGHV4-39P01824 125 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 HOXB4P17483 251 aaPredicted RBP15.45■□□□□ 0.06
LSM5-204ENST00000409909 TNFRSF1BP20333 461 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 TTKP33981 857 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 TUBA1BP68363 451 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 TUBA4AP68366 448 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 POU3F1Q03052 451 aaPredicted RBP15.45■□□□□ 0.06
LSM5-204ENST00000409909 VEZF1Q14119 521 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 AGAP6Q5VW22 663 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 C11orf71Q6IPW1 123 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 ANKRD16Q6P6B7 361 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 KLHL24Q6TFL4 600 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 CLEC9AQ6UXN8 241 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 TUBA1AQ71U36 451 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 UEVLDQ8IX04 471 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 DEPDC4Q8N2C3 294 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 PCYOX1LQ8NBM8 494 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 ANKK1Q8NFD2 765 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 MAGEE2Q8TD90 523 aaPredicted RBP15.45■□□□□ 0.06
LSM5-204ENST00000409909 RASSF5Q8WWW0 418 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 RCN3Q96D15 328 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 TRMT61AQ96FX7 289 aaKnown RBP15.45■□□□□ 0.06
LSM5-204ENST00000409909 EMC6Q9BV81 110 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 ALG2Q9H553 416 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 CRLF2Q9HC73 371 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 OBP2BQ9NPH6 170 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 GID8Q9NWU2 228 aa15.45■□□□□ 0.06
LSM5-204ENST00000409909 GDF2Q9UK05 429 aaPredicted RBP15.45■□□□□ 0.06
LSM5-204ENST00000409909 ARPC4-TTLL3A0A0A6YYG9 625 aa15.44■□□□□ 0.06
LSM5-204ENST00000409909 IGHV1-18A0A0C4DH31 117 aa15.44■□□□□ 0.06
LSM5-204ENST00000409909 ATP6V1G2-DDX39BF2Z307 99 aa15.44■□□□□ 0.06
LSM5-204ENST00000409909 SLC22A2O15244 555 aa15.44■□□□□ 0.06
LSM5-204ENST00000409909 MT-ATP6P00846 226 aa15.44■□□□□ 0.06
LSM5-204ENST00000409909 FABP6P51161 128 aa15.44■□□□□ 0.06
LSM5-204ENST00000409909 PUDPQ08623 228 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms