RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ICE1Q9Y2F5 2266 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 A8MVJ9 347 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 PRSS44E7EML9 344 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 LILRB3O75022 631 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 NXPH3O95157 252 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 HSD3B2P26439 372 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 CD80P33681 288 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 RAB5BP61020 215 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 RAP2BP61225 183 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 IL13RA1P78552 427 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 GUCA2BQ16661 112 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 RASGRP3Q8IV61 690 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 ANKRD53Q8N9V6 530 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 OR10Z1Q8NGY1 313 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 LHFPL5Q8TAF8 219 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 NEURL3Q96EH8 262 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 POFUT1Q9H488 388 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 TMEM38AQ9H6F2 299 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 CYSLTR2Q9NS75 346 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 LHX6Q9UPM6 363 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 C4orf47A7E2U8 309 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 SLC25A12O75746 678 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 ZNF888P0CJ79 500 aaPredicted RBP8.12□□□□□ -1.11
RTN4-206ENST00000394611 NQO2P16083 231 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 PTBP1P26599 531 aaKnown RBP eCLIP8.12□□□□□ -1.111e-7■■■■□ 26.1
RTN4-206ENST00000394611 CLEC12BQ2HXU8 276 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 CYB5R2Q6BCY4 276 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 ARMC6Q6NXE6 501 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 MBOAT2Q6ZWT7 520 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 OR5T3Q8NGG3 340 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 OR5AK2Q8NH90 309 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 FBLIM1Q8WUP2 373 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 MRPL48Q96GC5 212 aaKnown RBP8.12□□□□□ -1.11
RTN4-206ENST00000394611 JSRP1Q96MG2 331 aaPredicted RBP8.12□□□□□ -1.11
RTN4-206ENST00000394611 WDFY2Q96P53 400 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 KLF16Q9BXK1 252 aaPredicted RBP8.12□□□□□ -1.11
RTN4-206ENST00000394611 SRMSQ9H3Y6 488 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 UNKLQ9H9P5 680 aaKnown RBP8.12□□□□□ -1.11
RTN4-206ENST00000394611 SLC25A19Q9HC21 320 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 SOHLH2Q9NX45 425 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 SLC23A2Q9UGH3 650 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 HEATR5BQ9P2D3 2071 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 TMEM235A6NFC5 223 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 EMC8O43402 210 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 SBK2P0C263 348 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 TIMP2P16035 220 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 CPT2P23786 658 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 SLC6A6P31641 620 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 SIRPAP78324 504 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 ENPP2Q13822 863 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 FAM209BQ5JX69 171 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 GAREM2Q75VX8 874 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 SLC29A4Q7RTT9 530 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 OOSP2Q86WS3 158 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 ZNF584Q8IVC4 421 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 CPXM2Q8N436 756 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 MRPL43Q8N983 215 aaKnown RBP8.12□□□□□ -1.11
RTN4-206ENST00000394611 KREMEN2Q8NCW0 462 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 OR1S2Q8NGQ3 325 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 MFSD8Q8NHS3 518 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 SCARB1Q8WTV0 552 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 RGP1Q92546 391 aaPredicted RBP8.12□□□□□ -1.11
RTN4-206ENST00000394611 Q96M85 177 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 C5orf34Q96MH7 638 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 NPAS1Q99742 590 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 DPEP2Q9H4A9 486 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 DEC1Q9P2X7 70 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 LSM5Q9Y4Y9 91 aaKnown RBP8.12□□□□□ -1.11
RTN4-206ENST00000394611 PUS1Q9Y606 427 aaKnown RBP eCLIP8.12□□□□□ -1.11
RTN4-206ENST00000394611 MPDZO75970 2070 aa8.12□□□□□ -1.11
RTN4-206ENST00000394611 RPS10-NUDT3A0A1W2PQS6 291 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 ZNF878C9JN71 531 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 NME1P15531 152 aaKnown RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 ZNF30P17039 623 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 SRMP19623 302 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 HTR1FP30939 366 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 RPS10P46783 165 aaKnown RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 OR3A2P47893 321 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 MTNR1BP49286 362 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 NR0B1P51843 470 aaKnown RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 SNU13P55769 128 aaKnown RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 CTXN1P60606 82 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 SNRPNP63162 240 aaKnown RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 TSC22D1Q15714 1073 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 GGTA1PQ4G0N0 100 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 C4orf17Q53FE4 359 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 RNASE10Q5GAN6 216 aaKnown RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 C12orf73Q69YU5 71 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 MRM1Q6IN84 353 aaKnown RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 C1orf94Q6P1W5 598 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 VITQ6UXI7 678 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 ETFBKMTQ8IXQ9 262 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 YAF2Q8IY57 180 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 MUC20Q8N307 709 aaPredicted RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 OR56A1Q8NGH5 318 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 UBTD2Q8WUN7 234 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 SLC46A2Q9BY10 475 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 ZNF701Q9NV72 531 aaPredicted RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 CBLCQ9ULV8 474 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 LSM2Q9Y333 95 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms