RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 UBQLNLQ8IYU4 475 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 UFD1Q92890 307 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ERGIC1Q969X5 290 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 C9orf72Q96LT7 481 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 CCDC42Q96M95 316 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 PAIP2Q9BPZ3 127 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 LMF2Q9BU23 707 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 WWP1Q9H0M0 922 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ATP13A3Q9H7F0 1226 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SUDS3Q9H7L9 328 aaPredicted RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SLC38A10Q9HBR0 1119 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 MOV10Q9HCE1 1003 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 MEPEQ9NQ76 525 aaPredicted RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 TMEM9Q9P0T7 183 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 CARD8Q9Y2G2 431 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 V9GYH0 126 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 A0A087WUJ7 227 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 A0A1W2PPV4 95 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 TYW5A2RUC4 315 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 C7orf66A4D0T2 115 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 DNAJC9-AS1A6NH13 148 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 LRRC30A6NM36 301 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF705EA8MWA4 302 aaPredicted RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 B4DGG1 531 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 GOLGA8KD6RF30 607 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 HSPA12AO43301 675 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 GMFGO60234 142 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 MPC2O95563 127 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 PLEKP08567 350 aaPredicted RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 FBP1P09467 338 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 RRASP10301 218 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 AKR1A1P14550 325 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 IMPDH1P20839 514 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 CTRLP40313 264 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 XGP55808 180 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ECH1Q13011 328 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF79Q15937 498 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ITPRIPL2Q3MIP1 535 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 TDRD12Q587J7 1177 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 PAPPA-AS1Q5QFB9 102 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SAPCD1Q5SSQ6 148 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SPSB3Q6PJ21 355 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 PARM1Q6UWI2 310 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 LCTLQ6UWM7 567 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 MRGPREQ86SM8 312 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 NT5DC3Q86UY8 548 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 C17orf64Q86WR6 236 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 CHSY1Q86X52 802 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 CROCCP3Q8IVE0 287 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 C11orf53Q8IXP5 236 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 TFGQ92734 400 aaPredicted RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 C8orf44Q96CB5 159 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 CDKN2AIPNLQ96HQ2 116 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 PLEKHA8Q96JA3 519 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 TBC1D10AQ9BXI6 508 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SLC19A3Q9BZV2 496 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 FAM107BQ9H098 131 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 FAM234AQ9H0X4 552 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF442Q9H7R0 627 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 PARVBQ9HBI1 364 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 GLOD4Q9HC38 313 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 TAS2R1Q9NYW7 299 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ARPC4-TTLL3A0A0A6YYG9 625 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 KIR2DS5A0A0G2JLQ3 304 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 F8VP50 259 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 KIR2DS3K7RE56 304 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 PRAMEF4O60810 478 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 PRAMEF11O60813 436 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 CNMDO75829 334 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 ACSL3O95573 720 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 MOCS2O96007 188 aaPredicted RBP1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 MMP1P03956 469 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 C8orf88P0DMB2 117 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 MBL2P11226 248 aaPredicted RBP1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 HMGA1P17096 107 aaKnown RBP1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 ERP29P30040 261 aaKnown RBP1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 EPHX2P34913 555 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 SPRP35270 261 aaPredicted RBP1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 UCNP55089 124 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 MTCP1P56278 107 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 MXRA7P84157 204 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 OC90Q02509 493 aaPredicted RBP1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 TAF10Q12962 218 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 PRDX4Q13162 271 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF177Q13360 481 aaPredicted RBP1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 ALKBH1Q13686 389 aaKnown RBP1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 FAM53BQ14153 422 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 FASTKD3Q14CZ7 662 aaKnown RBP1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 CYTH1Q15438 398 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 VMACQ2NL98 169 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 CHRFAM7AQ494W8 412 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 C2CD6Q53TS8 623 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 CDKL4Q5MAI5 379 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 KLC3Q6P597 504 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 TMPRSS11FQ6ZWK6 438 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 CENPUQ71F23 418 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 TSEN54Q7Z6J9 526 aaKnown RBP1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 PRUNE1Q86TP1 453 aa1.52□□□□□ -2.17
SMARCAD1-202ENST00000359052 RALGPS2Q86X27 583 aaPredicted RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms