RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 GORASP2Q9H8Y8 452 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 B3GAT1Q9P2W7 334 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 SNX13Q9Y5W8 968 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 POLQO75417 2590 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.91■□□□□ 0.3
SYNE4-202ENST00000340477 HTR3EA5X5Y0 456 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 OR5H1A6NKK0 313 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 LRRN3E7EW58 273 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 PLPP3O14495 311 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 SERPINI2O75830 405 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 IGF2P01344 180 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 LTBQ06643 244 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 C9orf135Q5VTT2 229 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 HMBOX1Q6NT76 420 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 PXKQ7Z7A4 578 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 NKAIN4Q8IVV8 208 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 C17orf78Q8N4C9 275 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 PIK3C3Q8NEB9 887 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 ANKK1Q8NFD2 765 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 MCUR1Q96AQ8 359 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 PLPPR2Q96GM1 343 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 ALKBH3Q96Q83 286 aaPredicted RBP16.91■□□□□ 0.3
SYNE4-202ENST00000340477 LINC00470Q9BZP3 86 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 B3GAT2Q9NPZ5 323 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 DCAF13Q9NV06 445 aaKnown RBP16.91■□□□□ 0.3
SYNE4-202ENST00000340477 A4GNTQ9UNA3 340 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 ABCA4P78363 2273 aa16.91■□□□□ 0.3
SYNE4-202ENST00000340477 ZNF726A6NNF4 738 aa16.9■□□□□ 0.3
SYNE4-202ENST00000340477 C11orf98E9PRG8 122 aa16.9■□□□□ 0.3
SYNE4-202ENST00000340477 RNF13O43567 381 aa16.9■□□□□ 0.3
SYNE4-202ENST00000340477 TRAF3IP2O43734 574 aaPredicted RBP16.9■□□□□ 0.3
SYNE4-202ENST00000340477 ITGA2P17301 1181 aa16.9■□□□□ 0.3
SYNE4-202ENST00000340477 DNASE1P24855 282 aa16.9■□□□□ 0.3
SYNE4-202ENST00000340477 YAP1P46937 504 aaKnown RBP16.9■□□□□ 0.3
SYNE4-202ENST00000340477 UGT2B15P54855 530 aa16.9■□□□□ 0.3
SYNE4-202ENST00000340477 SH3BGRP55822 239 aaPredicted RBP16.9■□□□□ 0.3
SYNE4-202ENST00000340477 C1QTNF12Q5T7M4 302 aa16.9■□□□□ 0.3
SYNE4-202ENST00000340477 RBM15BQ8NDT2 890 aaKnown RBP16.9■□□□□ 0.3
SYNE4-202ENST00000340477 NINJ1Q92982 152 aa16.9■□□□□ 0.3
SYNE4-202ENST00000340477 MAGED1Q9Y5V3 778 aaPredicted RBP16.9■□□□□ 0.3
SYNE4-202ENST00000340477 ENPP4Q9Y6X5 453 aa16.9■□□□□ 0.3
SYNE4-202ENST00000340477 CREBBPQ92793 2442 aa16.9■□□□□ 0.3
SYNE4-202ENST00000340477 MS4A18H0YCH9 400 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 ARPC2O15144 300 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 OR7A10O76100 309 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 STAMBPO95630 424 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 HPRP00739 348 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 ITGA5P08648 1049 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 CDH2P19022 906 aaPredicted RBP16.89■□□□□ 0.29
SYNE4-202ENST00000340477 GABRA6Q16445 453 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 FXNQ16595 210 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 MS4A18Q3C1V0 323 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 KLHL17Q6TDP4 642 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 PAMR1Q6UXH9 720 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 C22orf34Q6ZV56 151 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 RRM2BQ7LG56 351 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 TRPM8Q7Z2W7 1104 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 CDK20Q8IZL9 346 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 PFN4Q8NHR9 129 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 MUC13Q9H3R2 512 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 MEPEQ9NQ76 525 aaPredicted RBP16.89■□□□□ 0.29
SYNE4-202ENST00000340477 RHCGQ9UBD6 479 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 CD300AQ9UGN4 299 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 ST6GALNAC2Q9UJ37 374 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 AMDHD2Q9Y303 409 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 V9GYQ6 96 aa16.89■□□□□ 0.29
SYNE4-202ENST00000340477 PDLIM1O00151 329 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 SIAH2O43255 324 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 KLF4O43474 513 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 WNT11O96014 354 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 RAF1P04049 648 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 CD3EP07766 207 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 ASAH2BP0C7U1 165 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 FUT1P19526 365 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 KEAP1Q14145 624 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 ZNF730Q6ZMV8 503 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 HDDC2Q7Z4H3 204 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 OR52N5Q8NH56 324 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 NRGNQ92686 78 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 ADAD1Q96M93 576 aaKnown RBP16.88■□□□□ 0.29
SYNE4-202ENST00000340477 OR2M2Q96R28 347 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 ANKRD19PQ9H560 264 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 UBTD1Q9HAC8 227 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 KRCC1Q9NPI7 259 aaPredicted RBP16.88■□□□□ 0.29
SYNE4-202ENST00000340477 ITGB1BP2Q9UKP3 347 aa16.88■□□□□ 0.29
SYNE4-202ENST00000340477 HRNRQ86YZ3 2850 aaPredicted RBP16.87■□□□□ 0.29
SYNE4-202ENST00000340477 SPG11Q96JI7 2443 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 A0A1W2PRG6 482 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 MCIDASD6RGH6 385 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 BLOC1S5-TXNDC5H3BN57 136 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 J3KTA2 159 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 ZNF432O94892 652 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 SAGP10523 405 aaPredicted RBP16.87■□□□□ 0.29
SYNE4-202ENST00000340477 IFI30P13284 250 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 RHCEP18577 417 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 MSX2P35548 267 aaPredicted RBP16.87■□□□□ 0.29
SYNE4-202ENST00000340477 UBE2NP61088 152 aaKnown RBP16.87■□□□□ 0.29
SYNE4-202ENST00000340477 ROR2Q01974 943 aaKnown RBP16.87■□□□□ 0.29
SYNE4-202ENST00000340477 ZP4Q12836 540 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 MTX3Q5HYI7 312 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms