RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 NUDT1P36639 197 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 PSMA6P60900 246 aaKnown RBP18.13■□□□□ 0.49
CRLF3-201ENST00000324238 RAB14P61106 215 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 SIGLEC14Q08ET2 396 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 TEX19Q8NA77 164 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 MRGPRX1Q96LB2 322 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 CXorf58Q96LI9 332 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 ALG12Q9BV10 488 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 TAS2R10Q9NYW0 307 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 PIPOXQ9P0Z9 390 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 COPZ2Q9P299 210 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 MYEF2Q9P2K5 600 aaKnown RBP18.13■□□□□ 0.49
CRLF3-201ENST00000324238 ICAM5Q9UMF0 924 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 OR10H1Q9Y4A9 318 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 V9GY05 133 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 TRAV8-7A0A075B6U6 113 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 HTR4Q13639 388 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 PWWP2BQ6NUJ5 590 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 TMEM92Q6UXU6 159 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 MAMSTRQ6ZN01 415 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 LRRC69Q6ZNQ3 347 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 OR5M1Q8NGP8 315 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 OR14A16Q8NHC5 309 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 RSC1A1Q92681 617 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 DVL3Q92997 716 aaPredicted RBP18.13■□□□□ 0.49
CRLF3-201ENST00000324238 PPP1R14AQ96A00 147 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 STACQ99469 402 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 NKX2-4Q9H2Z4 354 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 MKKSQ9NPJ1 570 aaPredicted RBP18.13■□□□□ 0.49
CRLF3-201ENST00000324238 KLHL9Q9P2J3 617 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 SERTAD3Q9UJW9 196 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 GTF2A1LQ9UNN4 478 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 SPACA6W5XKT8 324 aa18.13■□□□□ 0.49
CRLF3-201ENST00000324238 ARPC5O15511 151 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 GALR3O60755 368 aaPredicted RBP18.12■□□□□ 0.49
CRLF3-201ENST00000324238 MAOAP21397 527 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 ITPKBP27987 946 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 ACTA2P62736 377 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 ACTG2P63267 376 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 LIPNQ5VXI9 398 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 FGD2Q7Z6J4 655 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 OR13H1Q8NG92 308 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 OR8S1Q8NH09 359 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 SLC22A18Q96BI1 424 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 ADAD1Q96M93 576 aaKnown RBP18.12■□□□□ 0.49
CRLF3-201ENST00000324238 GINS4Q9BRT9 223 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 A0A1B0GVI7 797 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 NFATC4Q14934 902 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 KIR2DS3Q14952 304 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 OVCH1Q7RTY7 1134 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 SLITRK4Q8IW52 837 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 GLB1L2Q8IW92 636 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 RNF166Q96A37 237 aaPredicted RBP18.12■□□□□ 0.49
CRLF3-201ENST00000324238 RBM18Q96H35 190 aaKnown RBP18.12■□□□□ 0.49
CRLF3-201ENST00000324238 ZNF426Q9BUY5 554 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 TRIM2Q9C040 744 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 FOXJ3Q9UPW0 622 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 ZNF281Q9Y2X9 895 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 TICRRQ7Z2Z1 1910 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 PYCARD-AS1I3L0S3 204 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 AIPO00170 330 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 NKX2-2O95096 273 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 MAP3K8P41279 467 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 EFNB2P52799 333 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 ZMYND11Q15326 602 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 ULK3Q6PHR2 472 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 CBLN3Q6UW01 205 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 STAC2Q6ZMT1 411 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 AVL9Q8NBF6 648 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 TCF7L1Q9HCS4 588 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 DENND4AQ7Z401 1863 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 ARID1AO14497 2285 aa18.12■□□□□ 0.49
CRLF3-201ENST00000324238 S1PR1P21453 382 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 ZNF10P21506 573 aaPredicted RBP18.11■□□□□ 0.49
CRLF3-201ENST00000324238 POU4F2Q12837 409 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 DYRK1AQ13627 763 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 CBFBQ13951 182 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 IDO2Q6ZQW0 420 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 TAF8Q7Z7C8 310 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 ZDHHC1Q8WTX9 485 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 ATOH1Q92858 354 aaPredicted RBP18.11■□□□□ 0.49
CRLF3-201ENST00000324238 S100A16Q96FQ6 103 aaKnown RBP18.11■□□□□ 0.49
CRLF3-201ENST00000324238 LINC00052Q96N35 136 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 GSX2Q9BZM3 304 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 MAB21L2Q9Y586 359 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 FANCMQ8IYD8 2048 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 A0A087WV62 115 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 ST6GAL1P15907 406 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 ENPP2Q13822 863 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 SLC2A12Q8TD20 617 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 CTHRC1Q96CG8 243 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 ZCCHC4Q9H5U6 513 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 SYNDIG1Q9H7V2 258 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 WDR76Q9H967 626 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 FRRS1LQ9P0K9 344 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 CPNE7Q9UBL6 633 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 ERVK-19Q9WJR5 959 aa18.11■□□□□ 0.49
CRLF3-201ENST00000324238 B8ZZF3 427 aa18.1■□□□□ 0.49
CRLF3-201ENST00000324238 L7N2F9 121 aa18.1■□□□□ 0.49
CRLF3-201ENST00000324238 ATF4P18848 351 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms