RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 THOC3Q96J01 351 aaKnown RBP16.6■□□□□ 0.25
USP39-201ENST00000323701 PLGRKTQ9HBL7 147 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 RPRD1BQ9NQG5 326 aaKnown RBP16.6■□□□□ 0.25
USP39-201ENST00000323701 PMF1-BGLAPU3KQ54 211 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 PLPP3O14495 311 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 SLC22A1O15245 554 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 DXOO77932 396 aaKnown RBP16.6■□□□□ 0.25
USP39-201ENST00000323701 AHSA1O95433 338 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 BCL10O95999 233 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 MLLT11Q13015 90 aaPredicted RBP16.6■□□□□ 0.25
USP39-201ENST00000323701 OR7A5Q15622 319 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 TMEM81Q6P7N7 255 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 PLCZ1Q86YW0 608 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 BEST3Q8N1M1 668 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 EXD3Q8N9H8 876 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 OR4K17Q8NGC6 315 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 PPP1R14BQ96C90 147 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 MRGPRX4Q96LA9 322 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 ARHGAP9Q9BRR9 750 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 TTTY10Q9BZA0 68 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 RACGAP1Q9H0H5 632 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 CCDC86Q9H6F5 360 aaKnown RBP16.6■□□□□ 0.25
USP39-201ENST00000323701 RPH3AQ9Y2J0 694 aaPredicted RBP16.6■□□□□ 0.25
USP39-201ENST00000323701 PCDHGB6Q9Y5F9 930 aa16.6■□□□□ 0.25
USP39-201ENST00000323701 SPIN1Q9Y657 262 aaPredicted RBP16.6■□□□□ 0.25
USP39-201ENST00000323701 FREM3P0C091 2139 aa16.59■□□□□ 0.25
USP39-201ENST00000323701 IDH3BO43837 385 aa16.59■□□□□ 0.25
USP39-201ENST00000323701 TXNDC12O95881 172 aa16.59■□□□□ 0.25
USP39-201ENST00000323701 INHBBP09529 407 aa16.59■□□□□ 0.25
USP39-201ENST00000323701 PYCR1P32322 319 aa16.59■□□□□ 0.25
USP39-201ENST00000323701 ACBD7Q8N6N7 88 aa16.59■□□□□ 0.25
USP39-201ENST00000323701 IL22RA1Q8N6P7 574 aa16.59■□□□□ 0.25
USP39-201ENST00000323701 PSD4Q8NDX1 1056 aa16.59■□□□□ 0.25
USP39-201ENST00000323701 SPRYD4Q8WW59 207 aaPredicted RBP16.59■□□□□ 0.25
USP39-201ENST00000323701 JSRP1Q96MG2 331 aaPredicted RBP16.59■□□□□ 0.25
USP39-201ENST00000323701 JAM3Q9BX67 310 aa16.59■□□□□ 0.25
USP39-201ENST00000323701 GRHPRQ9UBQ7 328 aa16.59■□□□□ 0.25
USP39-201ENST00000323701 MAGEB4O15481 346 aaPredicted RBP16.58■□□□□ 0.25
USP39-201ENST00000323701 RNF13O43567 381 aa16.58■□□□□ 0.25
USP39-201ENST00000323701 APEHP13798 732 aaKnown RBP16.58■□□□□ 0.25
USP39-201ENST00000323701 NAA10P41227 235 aaPredicted RBP16.58■□□□□ 0.25
USP39-201ENST00000323701 DNASE1L1P49184 302 aa16.58■□□□□ 0.25
USP39-201ENST00000323701 SRSF6Q13247 344 aaKnown RBP16.58■□□□□ 0.25
USP39-201ENST00000323701 C1DQ13901 141 aaKnown RBP16.58■□□□□ 0.25
USP39-201ENST00000323701 ACKR1Q16570 336 aa16.58■□□□□ 0.25
USP39-201ENST00000323701 LINC01590Q5TEZ4 76 aa16.58■□□□□ 0.25
USP39-201ENST00000323701 DYNC2LI1Q8TCX1 351 aa16.58■□□□□ 0.25
USP39-201ENST00000323701 SMPDL3BQ92485 455 aa16.58■□□□□ 0.25
USP39-201ENST00000323701 TMEM203Q969S6 136 aa16.58■□□□□ 0.25
USP39-201ENST00000323701 BCL7BQ9BQE9 202 aa16.58■□□□□ 0.25
USP39-201ENST00000323701 NDUFB11Q9NX14 153 aa16.58■□□□□ 0.25
USP39-201ENST00000323701 HAO2Q9NYQ3 351 aa16.58■□□□□ 0.25
USP39-201ENST00000323701 PTPRBP23467 1997 aa16.58■□□□□ 0.25
USP39-201ENST00000323701 A0A1W2PQL4 384 aaPredicted RBP16.58■□□□□ 0.24
USP39-201ENST00000323701 MS4A18H0YCH9 400 aa16.58■□□□□ 0.24
USP39-201ENST00000323701 TM4SF5O14894 197 aa16.58■□□□□ 0.24
USP39-201ENST00000323701 TFPIP10646 304 aa16.58■□□□□ 0.24
USP39-201ENST00000323701 CRYBB2P43320 205 aa16.58■□□□□ 0.24
USP39-201ENST00000323701 CLK1P49759 484 aaKnown RBP16.58■□□□□ 0.24
USP39-201ENST00000323701 ZNF85Q03923 595 aa16.58■□□□□ 0.24
USP39-201ENST00000323701 KRR1Q13601 381 aaKnown RBP16.58■□□□□ 0.24
USP39-201ENST00000323701 MS4A18Q3C1V0 323 aa16.58■□□□□ 0.24
USP39-201ENST00000323701 DCAF10Q5QP82 559 aa16.58■□□□□ 0.24
USP39-201ENST00000323701 ZNF322Q6U7Q0 402 aaPredicted RBP16.58■□□□□ 0.24
USP39-201ENST00000323701 DTX1Q86Y01 620 aa16.58■□□□□ 0.24
USP39-201ENST00000323701 SPTBN2O15020 2390 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 A0A1W2PNR3 127 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 CDRT15L2A8MXV6 281 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 ZNF208O43345 1280 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 SELENOFO60613 162 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 LIFP15018 202 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 CPEP16870 476 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 RUNX1T1Q06455 604 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 MYBPHQ13203 477 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 ZNF511Q8NB15 262 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 OR6K6Q8NGW6 343 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 FNDC8Q8TC99 324 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 ADAMTS14Q8WXS8 1223 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 ALG8Q9BVK2 526 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 ASPNQ9BXN1 380 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 SRA1Q9HD15 236 aaKnown RBP16.57■□□□□ 0.24
USP39-201ENST00000323701 ASCL3Q9NQ33 180 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 DEPPQ9NTK1 212 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 MRPL39Q9NYK5 338 aaKnown RBP16.57■□□□□ 0.24
USP39-201ENST00000323701 ZMIZ1Q9ULJ6 1067 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 SLC6A5Q9Y345 797 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 SIRT4Q9Y6E7 314 aaPredicted RBP16.57■□□□□ 0.24
USP39-201ENST00000323701 PRRC2CQ9Y520 2896 aaKnown RBP16.57■□□□□ 0.24
USP39-201ENST00000323701 NCKAP5O14513 1909 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 DAPL1A0PJW8 107 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 LIPT2A6NK58 231 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 SNPHO15079 494 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 OR2T1O43869 369 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 ZIC3O60481 467 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 AKR7A3O95154 331 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 GPANK1O95872 356 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 KLK2P20151 261 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 DIO1P49895 249 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 OTPQ5XKR4 325 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 VASNQ6EMK4 673 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms