RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 P2RY14Q15391 338 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 ADIRFQ15847 76 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.24□□□□□ -0.61
PCF11-201ENST00000298281 GPR150Q8NGU9 434 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 ALOXE3Q9BYJ1 711 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 ULBP2Q9BZM5 246 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 PAQR5Q9NXK6 330 aaPredicted RBP11.24□□□□□ -0.61
PCF11-201ENST00000298281 PRRC2BQ5JSZ5 2229 aaKnown RBP11.24□□□□□ -0.61
PCF11-201ENST00000298281 COL14A1Q05707 1796 aaKnown RBP11.24□□□□□ -0.61
PCF11-201ENST00000298281 HS3ST1O14792 307 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 SNAPINO95295 136 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 CTSAP10619 480 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 MAOBP27338 520 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 CLINT1Q14677 625 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 NADSYN1Q6IA69 706 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 OR4M1Q8NGD0 313 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 OR5W2Q8NH69 310 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 FNDC8Q8TC99 324 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 SAMD8Q96LT4 415 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 RDH14Q9HBH5 336 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 ABCD4O14678 606 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 ITGB7P26010 798 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 TAS2R46P59540 309 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 TBC1D28Q2M2D7 210 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 MPEG1Q2M385 716 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 TMEM31Q5JXX7 168 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 ZNF595Q8IYB9 648 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 MYADMQ96S97 322 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 A0A1W2PQL4 384 aaPredicted RBP11.24□□□□□ -0.61
PCF11-201ENST00000298281 ZFP92A6NM28 416 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 RGS11O94810 467 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 TPOP07202 933 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 ZDHHC11BP0C7U3 371 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 APEHP13798 732 aaKnown RBP11.24□□□□□ -0.61
PCF11-201ENST00000298281 OR4D1Q15615 310 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 SLC24A4Q8NFF2 622 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 DPH2Q9BQC3 489 aaPredicted RBP11.24□□□□□ -0.61
PCF11-201ENST00000298281 ELOVL3Q9HB03 270 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 MARCH4Q9P2E8 410 aaPredicted RBP11.24□□□□□ -0.61
PCF11-201ENST00000298281 HBE1P02100 147 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 ICAM2P13598 275 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 HOXD13P35453 343 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 EIF2DP41214 584 aaKnown RBP11.24□□□□□ -0.61
PCF11-201ENST00000298281 SLC9A3R2Q15599 337 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 RAB6CQ53S08 254 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 MMP21Q8N119 569 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 OR2T6Q8NHC8 308 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 SLC35E1Q96K37 410 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 BET1LQ9NYM9 111 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 KIF13AQ9H1H9 1805 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 P2RX6O15547 441 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 RGNQ15493 299 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 C17orf107Q6ZR85 190 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 H2BFWTQ7Z2G1 175 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 EID2Q8N6I1 236 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 LILRB1Q8NHL6 650 aaPredicted RBP11.24□□□□□ -0.61
PCF11-201ENST00000298281 RTP3Q9BQQ7 232 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 LMAN1LQ9HAT1 526 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 MMACHCQ9Y4U1 282 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 ZNF701M0R085 212 aaPredicted RBP11.23□□□□□ -0.61
PCF11-201ENST00000298281 OR5G3P0C626 314 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 HLA-DMAP28067 261 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 TAGLN2P37802 199 aaKnown RBP11.23□□□□□ -0.61
PCF11-201ENST00000298281 GSCP56915 257 aaPredicted RBP11.23□□□□□ -0.61
PCF11-201ENST00000298281 DCAF7P61962 342 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 FGFBP1Q14512 234 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 SLC36A2Q495M3 483 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 ISCA2Q86U28 154 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 ELMOD3Q96FG2 381 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 TGIF2Q9GZN2 237 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 ZDHHC11Q9H8X9 412 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 WASH6PQ9NQA3 447 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 FER1L5A0AVI2 2057 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 LOC285095A0A1B0GVY8 99 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 SLC43A1O75387 559 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 LAMP1P11279 417 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 RTL8BQ17RB0 113 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 BTNL8Q6UX41 500 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 PLXDC2Q6UX71 529 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 SMAP2Q8WU79 429 aaPredicted RBP11.23□□□□□ -0.61
PCF11-201ENST00000298281 SDR39U1Q9NRG7 319 aaPredicted RBP11.23□□□□□ -0.61
PCF11-201ENST00000298281 C1orf123Q9NWV4 160 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 TMEM65Q6PI78 240 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 FER1L6-AS2Q96M78 137 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 GAR1Q9NY12 217 aaKnown RBP11.23□□□□□ -0.61
PCF11-201ENST00000298281 RNF150Q9ULK6 438 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 SGK494L7N484 410 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 IGHG1P01857 330 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 HLA-AP01891 365 aaKnown RBP11.23□□□□□ -0.61
PCF11-201ENST00000298281 PSMB10P40306 273 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 RHOBP62745 196 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 STEAP1BQ6NZ63 245 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 PDZD3Q86UT5 571 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 TMEM239Q8WW34 195 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 OR51E2Q9H255 320 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 SH3BP2P78314 561 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 RAB40BQ12829 278 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 ZNF551Q7Z340 670 aaPredicted RBP11.23□□□□□ -0.61
PCF11-201ENST00000298281 FYTTD1Q96QD9 318 aaKnown RBP11.23□□□□□ -0.61
PCF11-201ENST00000298281 HEBP1Q9NRV9 189 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms