RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ZNF169Q14929 603 aaPredicted RBP15.97■□□□□ 0.15
SHANK1-201ENST00000293441 WBP2Q969T9 261 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 ELP4Q96EB1 424 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 PGAP2Q9UHJ9 254 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 LOXHD1Q8IVV2 1947 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 CDHR4A6H8M9 788 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 ANKRD33BA6NCL7 494 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 LRIT2A6NDA9 550 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 SURF4O15260 269 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 SEC14L2O76054 403 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 IGFBP6P24592 240 aaPredicted RBP15.97■□□□□ 0.15
SHANK1-201ENST00000293441 TAS2R46P59540 309 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 DESI1Q6ICB0 168 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 SGPP1Q9BX95 441 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 CLDN12P56749 244 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 GABREP78334 506 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 SPRED3Q2MJR0 410 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 AFMIDQ63HM1 303 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 BPIFB2Q8N4F0 458 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 MALSU1Q96EH3 234 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 ANKRD19PQ9H560 264 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 UNKLQ9H9P5 680 aaKnown RBP15.97■□□□□ 0.15
SHANK1-201ENST00000293441 SRFP11831 508 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 PRKAR1BP31321 381 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 BBS1Q8NFJ9 593 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 MAFAQ8NHW3 353 aaPredicted RBP15.97■□□□□ 0.15
SHANK1-201ENST00000293441 MFRPQ9BY79 579 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 HIPK2Q9H2X6 1198 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 HIF1ANQ9NWT6 349 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 PLPP1O14494 284 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 GRPP07492 148 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 APOOLQ6UXV4 268 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 YRDCQ86U90 279 aaKnown RBP15.97■□□□□ 0.15
SHANK1-201ENST00000293441 OR51J1Q9H342 316 aa15.97■□□□□ 0.15
SHANK1-201ENST00000293441 MRPS28Q9Y2Q9 187 aaKnown RBP15.97■□□□□ 0.15
SHANK1-201ENST00000293441 A0A1W2PPV4 95 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 TOR1AO14656 332 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 HOXA1P49639 335 aaPredicted RBP15.96■□□□□ 0.15
SHANK1-201ENST00000293441 LRRC28Q86X40 367 aaPredicted RBP15.96■□□□□ 0.15
SHANK1-201ENST00000293441 SLAMF9Q96A28 289 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 SGK3Q96BR1 496 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 RASD2Q96D21 266 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 ZNF582Q96NG8 517 aaPredicted RBP15.96■□□□□ 0.15
SHANK1-201ENST00000293441 NOX4Q9NPH5 578 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 MYOTQ9UBF9 498 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 AKR7A3O95154 331 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 LSAMPQ13449 338 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 MFSD12Q6NUT3 480 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 Q6ZSR9 355 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 CNTNAP3BQ96NU0 1288 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 GMPR2Q9P2T1 348 aaKnown RBP15.96■□□□□ 0.15
SHANK1-201ENST00000293441 WDR37Q9Y2I8 494 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 EDDM3BP56851 147 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 FGFBP1Q14512 234 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 PLPP6Q8IY26 295 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 TMEM59Q9BXS4 323 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 COQ3Q9NZJ6 369 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 RPH3ALQ9UNE2 315 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 N4BP2Q86UW6 1770 aaPredicted RBP15.96■□□□□ 0.15
SHANK1-201ENST00000293441 RNF212BA8MTL3 300 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 TMEM71Q6P5X7 295 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 PFN4Q8NHR9 129 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 NKX3-1Q99801 234 aaPredicted RBP15.96■□□□□ 0.15
SHANK1-201ENST00000293441 LYRM4Q9HD34 91 aa15.96■□□□□ 0.15
SHANK1-201ENST00000293441 NKX6-3A6NJ46 265 aa15.96■□□□□ 0.14
SHANK1-201ENST00000293441 F8W036 122 aa15.96■□□□□ 0.14
SHANK1-201ENST00000293441 OR2T7P0C7T2 308 aa15.96■□□□□ 0.14
SHANK1-201ENST00000293441 F2RL1P55085 397 aa15.96■□□□□ 0.14
SHANK1-201ENST00000293441 BLOC1S1P78537 153 aa15.96■□□□□ 0.14
SHANK1-201ENST00000293441 DPY19L2P2Q6ZN68 376 aa15.96■□□□□ 0.14
SHANK1-201ENST00000293441 RPS19BP1Q86WX3 136 aaKnown RBP15.96■□□□□ 0.14
SHANK1-201ENST00000293441 SCCPDHQ8NBX0 429 aa15.96■□□□□ 0.14
SHANK1-201ENST00000293441 OR2T27Q8NH04 317 aa15.96■□□□□ 0.14
SHANK1-201ENST00000293441 BCL7CQ8WUZ0 217 aaPredicted RBP15.96■□□□□ 0.14
SHANK1-201ENST00000293441 SIDT1Q9NXL6 827 aaKnown RBP15.96■□□□□ 0.14
SHANK1-201ENST00000293441 C2CD4DB7Z1M9 353 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 SLC34A2O95436 690 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 HLA-AP01891 365 aaKnown RBP15.95■□□□□ 0.14
SHANK1-201ENST00000293441 ALDH3B1P43353 468 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 TSFMP43897 325 aaKnown RBP15.95■□□□□ 0.14
SHANK1-201ENST00000293441 MSMO1Q15800 293 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 SLC16A11Q8NCK7 471 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 ELAVL4P26378 380 aaKnown RBP15.95■□□□□ 0.14
SHANK1-201ENST00000293441 FOXK2Q01167 660 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 RAB3CQ96E17 227 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 COQ10AQ96MF6 247 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 PRAF2O60831 178 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 ARL11Q969Q4 196 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 MED17Q9NVC6 651 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 A0A1W2PQ09 198 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 FZD7O75084 574 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 SNRPBP14678 240 aaKnown RBP15.95■□□□□ 0.14
SHANK1-201ENST00000293441 RAB6AP20340 208 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 MRGPRX1Q96LB2 322 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 SLC25A31Q9H0C2 315 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 RAB40ALP0C0E4 278 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 RPS25P62851 125 aaKnown RBP15.95■□□□□ 0.14
SHANK1-201ENST00000293441 CRMP1Q14194 572 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 ZNF674Q2M3X9 581 aa15.95■□□□□ 0.14
SHANK1-201ENST00000293441 SECTM1Q8WVN6 248 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms