RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 CDHR4A6H8M9 788 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 BOLA2-SMG1P6H3BVE0 249 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 B4GAT1O43505 415 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 RACK1P63244 317 aaKnown RBP12.27□□□□□ -0.45
COL1A1-201ENST00000225964 C6orf89Q6UWU4 347 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 B3GNT8Q7Z7M8 397 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 OR56B1Q8NGI3 324 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 OBP2AQ9NY56 170 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 TMEM72A0PK05 275 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 ZNF732B4DXR9 585 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 PTTG1O95997 202 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 ADRA1AP35348 466 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 PARM1Q6UWI2 310 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 HES7Q9BYE0 225 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 EGLN1Q9GZT9 426 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 TMEM212A6NML5 194 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 PRRG2O14669 202 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 OR10J4P0C629 311 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 MS4A2Q01362 244 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 RFLNAQ6ZTI6 216 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 ADGRG5Q8IZF4 528 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 ZFP82Q8N141 532 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 ST7LQ8TDW4 575 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 LIPHQ8WWY8 451 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 C1orf123Q9NWV4 160 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 BABAM2Q9NXR7 383 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 ADAM29Q9UKF5 820 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 E9PI62 339 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 SULT1C2O00338 296 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 AQP7O14520 342 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 RFPL3O75679 317 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 NFYAP23511 347 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 C14orf28Q4W4Y0 310 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 CLVS2Q5SYC1 327 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 C5orf46Q6UWT4 87 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 CYP4V2Q6ZWL3 525 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 SLC35G3Q8N808 338 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 SLC46A1Q96NT5 459 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 BIN3Q9NQY0 253 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 SMCO4Q9NRQ5 59 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 ACSS1Q9NUB1 689 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 H0Y8G0 127 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 M0R1B8 84 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 LCMT2O60294 686 aaKnown RBP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 EIF1BO60739 113 aaKnown RBP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 REEP5Q00765 189 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 ACTBL2Q562R1 376 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 ABHD4Q8TB40 342 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 TCTEX1D2Q8WW35 142 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 FIZ1Q96SL8 496 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 ALG12Q9BV10 488 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 C1GALT1Q9NS00 363 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 PIGLQ9Y2B2 252 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 H3BMQ9 156 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 SPINT2O43291 252 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 SNRNP70P08621 437 aaKnown RBP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 CST5P28325 142 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 BLVRBP30043 206 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 GABREP78334 506 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 KCNAB1Q14722 419 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 TDHQ8IZJ6 230 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 C3orf30Q96M34 536 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 TNFRSF13CQ96RJ3 184 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 GPR45Q9Y5Y3 372 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 A0A1B0GX78 115 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 HS3ST1O14792 307 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 CD27P26842 260 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 OR8G1Q15617 311 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 DEFB109BQ30KR1 87 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 HSF5Q4G112 596 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 ZNF691Q5VV52 312 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 CBLL1Q75N03 491 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 OR1N1Q8NGS0 311 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 OR13C9Q8NGT0 318 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 LKAAEAR1Q8TD35 194 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 ELP4Q96EB1 424 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 GORASP2Q9H8Y8 452 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 WDR76Q9H967 626 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 NOX4Q9NPH5 578 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 PUS1Q9Y606 427 aaKnown RBP eCLIP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 HOXD11P31277 338 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 RPL35P42766 123 aaKnown RBP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 ZNF750Q32MQ0 723 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 RPL22L1Q6P5R6 122 aaKnown RBP12.26□□□□□ -0.45
COL1A1-201ENST00000225964 CMIPQ8IY22 773 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 FRMD1Q8N878 549 aa12.26□□□□□ -0.45
COL1A1-201ENST00000225964 EFSO43281 561 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 GASTP01350 101 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 PMP2P02689 132 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 POU4F3Q15319 338 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 ZNF836Q6ZNA1 936 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 RNF113BQ8IZP6 322 aaKnown RBP12.25□□□□□ -0.45
COL1A1-201ENST00000225964 OR7G1Q8NGA0 311 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 PIGTQ969N2 578 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 APH1AQ96BI3 265 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 SHARPINQ9H0F6 387 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 CRYBG1Q9Y4K1 1723 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 MRPS14O60783 128 aaKnown RBP12.25□□□□□ -0.45
COL1A1-201ENST00000225964 CDK4P11802 303 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms