RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Gm13539A0A1B0GSM6 183 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Gm11127A7VMS2 374 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Cped1B2RX70 1026 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Zfp871G5E905 615 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Gm4141K9J7H2 306 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 RaxO35602 342 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Grem1O70326 184 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 PipP02816 146 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Polr2iP60898 125 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Hes5P70120 167 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Hyal4Q05A56 481 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 TefmQ5SSK3 364 aaKnown RBP12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Nectin4Q8R007 508 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Tor2aQ8R1J9 321 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Vmn1r212Q8R268 357 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Olfr1378Q8VGH0 315 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Adam33Q923W9 797 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Slco1a6Q99J94 670 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Clint1Q99KN9 631 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Elp5Q99L85 300 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Trappc2Q9CQP2 140 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Cyb5r1Q9DB73 305 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Cts8Q9JI81 333 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 SnapinQ9Z266 136 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Smpd5D6MZJ6 483 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Rab11bP46638 218 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 VldlrP98156 873 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Rnf223Q3UV31 285 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Slc30a10Q3UVU3 470 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Olfr1167Q7TR26 316 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Cdk3Q80YP0 303 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Olfr836Q8VFJ3 317 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Olfr676Q8VGZ9 317 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 AassQ99K67 926 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Hhipl2Q9D2G9 717 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Chp2Q9D869 196 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Sh3bgrlQ9JJU8 114 aaKnown RBP12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 H60cB1B213 197 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 SgceO70258 437 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Clk1P22518 483 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 EvlP70429 414 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Sema4cQ64151 834 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Rsl1Q7M6Y1 485 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Fbxl3Q8C4V4 428 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Olfr821Q8VG45 310 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 HadhbQ99JY0 475 aaKnown RBP12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Adad2Q9D5P4 478 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Olfr44Q9EQB8 314 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Hapln2Q9ESM3 341 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Clcf1Q9QZM3 225 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Ctla4P09793 223 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Otx2P80206 289 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Ugt2a3Q8BWQ1 534 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Slc25a21Q8BZ09 298 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Gpr157Q8C206 330 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Arrb2Q91YI4 410 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Psat1Q99K85 370 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Pfn3Q9DAD6 137 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Emc7Q9EP72 241 aa12.87□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Vmn2r107E9PZJ7 861 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Vmn2r48E9Q5D8 855 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Gm3727J3QM54 205 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Phb2O35129 299 aaKnown RBP12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 CpoxP36552 443 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Isg20l2Q3U1G5 368 aaKnown RBP12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 TfptQ3U1J1 259 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Orm3Q63805 206 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Alkbh2Q6P6J4 239 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Klhl9Q6ZPT1 617 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Znf516Q7TSH3 1157 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Atg4bQ8BGE6 393 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 PhyhipQ8K0S0 330 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 NaxeQ8K4Z3 282 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Ceacam20Q9D2Z1 577 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Tmem41aQ9D8U2 264 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Isoc2bQ9DCC7 210 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Slc15a1Q9JIP7 709 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 StrcQ8VIM6 1809 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Olfr1112A2ATA0 318 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Vmn2r124K7N789 855 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Pip5k1cO70161 661 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Fcgr2P08101 330 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 B430306N03RikQ6QX36 289 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Olfr1065Q7TR70 313 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Zbtb42Q811H0 420 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Olfr437Q8VEV1 310 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Olfr160Q8VGE3 309 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Ppa1Q9D819 289 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Ca7Q9ERQ8 264 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Igf2rQ07113 2483 aaKnown RBP12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Vmn2r45L7N2B5 852 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Hoxd4P10628 250 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Kcnn3P58391 732 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Gcnt7Q3V3K7 433 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Usp22Q5DU02 525 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Clns1aQ61189 236 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Zik1Q80YP6 463 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Emc1Q8C7X2 997 aaKnown RBP12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Olfr669Q8VGU9 317 aa12.86□□□□□ -0.35
Pcdha1-202ENSMUST00000193839 Sucnr1Q99MT6 317 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 135.9 ms