RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 RBM4Q9BWF3 364 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 ZNF556Q9HAH1 456 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 USE1Q9NZ43 259 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 CLCF1Q9UBD9 225 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 SEC14L4Q9UDX3 406 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 HIF3AQ9Y2N7 669 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 KIAA1549Q9HCM3 1950 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 UNC119BA6NIH7 251 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 CD8B2A6NJW9 211 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 ZNF814B7Z6K7 855 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 PTP4A3O75365 173 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 KLK2P20151 261 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 UQCRC1P31930 480 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 PMS2P3Q13401 168 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 ANKRD34AQ69YU3 496 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 KDM4DQ6B0I6 523 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 ZBTB49Q6ZSB9 765 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 CBR4Q8N4T8 237 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 UCK2Q9BZX2 261 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 TP63Q9H3D4 680 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 CALHM2Q9HA72 323 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 SMURF2Q9HAU4 748 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 FANCFQ9NPI8 374 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 KIF17Q9P2E2 1029 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 SIGLEC7Q9Y286 467 aa17.71■□□□□ 0.43
PDLIM2-221ENST00000622702 SLC22A20A6NK97 555 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 PLPP3O14495 311 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 EI24O14681 340 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 VAMP5O95183 116 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 ALPLP05186 524 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 ACVR2AP27037 513 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 PEX2P28328 305 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 ZP4Q12836 540 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 DAG1Q14118 895 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 ZBED5Q49AG3 693 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 OGFRL1Q5TC84 451 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 NSUN5P2Q63ZY6 315 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 ABLIM2Q6H8Q1 611 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 RASSF6Q6ZTQ3 369 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 FCRLAQ7L513 359 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 SLC43A2Q8N370 569 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 CLDN22Q8N7P3 220 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 OR51A7Q8NH64 312 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 FNDC9Q8TBE3 224 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 RNF128Q8TEB7 428 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 ROBO4Q8WZ75 1007 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 TNFRSF13CQ96RJ3 184 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 C8orf4Q9NR00 106 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 TMEFF2Q9UIK5 374 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 RASD1Q9Y272 281 aa17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 UTP20O75691 2785 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-221ENST00000622702 TRAV27A0A087WT01 109 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 IGHV3-15A0A0B4J1V0 119 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 LOC102725191A0A1B0GVB3 256 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 A0A1W2PNV4 684 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 SOCS2O14508 198 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 CYTIPO60759 359 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 FCGR2AP12318 317 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 ALDH3A2P51648 485 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 PER3P56645 1201 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 PUDPQ08623 228 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 C1orf185Q5T7R7 199 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 LPCAT4Q643R3 524 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 RTL6Q6ICC9 239 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 PPP4R4Q6NUP7 873 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 KLHL17Q6TDP4 642 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 ZNF620Q6ZNG0 422 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 CCDC103Q8IW40 242 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 PARP8Q8N3A8 854 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 SSC4DQ8WTU2 575 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 WNT2BQ93097 391 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 TRIB1Q96RU8 372 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 SLC29A1Q99808 456 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 MCCC2Q9HCC0 563 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 PAPOLBQ9NRJ5 636 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 TAS2R5Q9NYW4 299 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 REV1Q9UBZ9 1251 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 POFUT2Q9Y2G5 429 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 MEMO1Q9Y316 297 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 FAM215AQ9Y5M1 114 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 MYO7BQ6PIF6 2116 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 MS4A18H0YCH9 400 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 BLOC1S5-TXNDC5H3BN57 136 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 RAMP1O60894 148 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 AQP8O94778 261 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 OR6A2O95222 327 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 TGM6O95932 706 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 HPRP00739 348 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 RNF224P0DH78 156 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 ADORA3P0DMS8 318 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 ZNF26P17031 533 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 PRPS1P60891 318 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 RPL18Q07020 188 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 POU4F3Q15319 338 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 MS4A18Q3C1V0 323 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 TMEM225Q6GV28 225 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 RPL13AP3Q6NVV1 102 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 SF3B5Q9BWJ5 86 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 PRRG4Q9BZD6 226 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 KRT84Q9NSB2 600 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms