RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 TET2Q6N021 2002 aaPredicted RBP2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 C12orf77C9JDV5 145 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 BET1O15155 118 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 IGLV2-23P01705 113 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 PTMAP06454 111 aaKnown RBP2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 MRPL3P09001 348 aaKnown RBP2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 PNMTP11086 282 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 NCF1P14598 390 aaPredicted RBP2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 HNF1AP20823 631 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 GCAP28676 217 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 DDOSTP39656 456 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 VGLL4Q14135 290 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 CARD16Q5EG05 197 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 PGAP1Q75T13 922 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 CCDC50Q8IVM0 306 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 RNF182Q8N6D2 247 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 OR1N2Q8NGR9 330 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 ECSITQ9BQ95 431 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 ACTR6Q9GZN1 396 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 CLMPQ9H6B4 373 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 RNF167Q9H6Y7 350 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 FARSBQ9NSD9 589 aaKnown RBP2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 KCNIP1Q9NZI2 227 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 PCYOX1Q9UHG3 505 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 COL1A2P08123 1366 aa2.71□□□□□ -1.98
SCAMP1-205ENST00000614488 IQANK1A0A1B0GTG1 560 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 RBMY1BA6NDE4 496 aaKnown RBP2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 RBMY1EA6NEQ0 496 aaKnown RBP2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 IDH1O75874 414 aaKnown RBP2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 CD5P06127 495 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 RBMY1DP0C7P1 496 aaKnown RBP2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 RBMY1A1P0DJD3 496 aaKnown RBP2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 ACTA2P62736 377 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 ACTC1P68032 377 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 SMARCB1Q12824 385 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 C1orf61Q13536 156 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 GANABQ14697 944 aaKnown RBP2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 RSPO1Q2MKA7 263 aaPredicted RBP2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 C1orf220Q5T0J3 134 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 RIPPLY2Q5TAB7 128 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 LYPD2Q6UXB3 125 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 NLRP9Q7RTR0 991 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 ZNF546Q86UE3 836 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 SLC38A6Q8IZM9 456 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 CTNNBL1Q8WYA6 563 aaPredicted RBP2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 ZNF578Q96N58 590 aaPredicted RBP2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 RIOK1Q9BRS2 568 aaKnown RBP2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 DNTTIP1Q9H147 329 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 TM9SF3Q9HD45 589 aa2.7□□□□□ -1.98
SCAMP1-205ENST00000614488 MROH7-TTC4A0A0A0MT08 1334 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 FANCIQ9NVI1 1328 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 A0A1B0GWJ7 208 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 OPN1MWP04001 364 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 CISD3P0C7P0 127 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 ZNF286BP0CG31 522 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 OPN1MW2P0DN77 364 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 OPN1MW3P0DN78 364 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 EPB41P11171 864 aaKnown RBP2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 IL12AP29459 219 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 BTCP35070 178 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 UBE2AP49459 152 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 PPT1P50897 306 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 GNMTQ14749 295 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 SLC15A2Q16348 729 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 SGCAQ16586 387 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 ABCA11PQ4W5N1 156 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 C19orf35Q6ZS72 473 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 CCDC80Q76M96 950 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 CCDC65Q8IXS2 484 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 TTC5Q8N0Z6 440 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 OR2G3Q8NGZ4 309 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 CD300LFQ8TDQ1 290 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 FRZBQ92765 325 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 TGM7Q96PF1 710 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 RNF2Q99496 336 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 THUMPD2Q9BTF0 503 aaKnown RBP2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 OR12D3Q9UGF7 316 aa2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 YTHDF2Q9Y5A9 579 aaKnown RBP2.69□□□□□ -1.98
SCAMP1-205ENST00000614488 RGSL1A5PLK6 1076 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 CCDC182A6NF36 153 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 RGS16O15492 202 aaPredicted RBP2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 CD5LO43866 347 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 CTDNEP1O95476 244 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 KRT8P05787 483 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 DRD5P21918 477 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 PCMT1P22061 227 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 OMGP23515 440 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 HMGCS1Q01581 520 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 OXA1LQ15070 435 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 USH1GQ495M9 461 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 SLC36A3Q495N2 470 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 COA6Q5JTJ3 125 aaKnown RBP2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 LY6G6FQ5SQ64 297 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 ZSCAN25Q6NSZ9 544 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 ZNF615Q8N8J6 731 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 FGF14Q92915 247 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 NHEJ1Q9H9Q4 299 aaPredicted RBP2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 THUMPD1Q9NXG2 353 aaKnown RBP2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 PIPOXQ9P0Z9 390 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 TMCO1Q9UM00 188 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms