RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 ZNF613Q6PF04 617 aa19.86■□□□□ 0.77
CCDC9-204ENST00000599398 CALHM3Q86XJ0 350 aa19.86■□□□□ 0.77
CCDC9-204ENST00000599398 RBM45Q8IUH3 476 aaKnown RBP19.86■□□□□ 0.77
CCDC9-204ENST00000599398 NEUROG1Q92886 237 aa19.86■□□□□ 0.77
CCDC9-204ENST00000599398 FBXW5Q969U6 566 aa19.86■□□□□ 0.77
CCDC9-204ENST00000599398 RCN3Q96D15 328 aa19.86■□□□□ 0.77
CCDC9-204ENST00000599398 OXGR1Q96P68 337 aa19.86■□□□□ 0.77
CCDC9-204ENST00000599398 USP22Q9UPT9 525 aa19.86■□□□□ 0.77
CCDC9-204ENST00000599398 B3GALT5Q9Y2C3 310 aa19.86■□□□□ 0.77
CCDC9-204ENST00000599398 SLC25A15Q9Y619 301 aa19.86■□□□□ 0.77
CCDC9-204ENST00000599398 ZNF469Q96JG9 3925 aaPredicted RBP19.86■□□□□ 0.77
CCDC9-204ENST00000599398 HEATR1Q9H583 2144 aaKnown RBP19.85■□□□□ 0.77
CCDC9-204ENST00000599398 ZNF587BE7ETH6 402 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 NQO1P15559 274 aaKnown RBP19.85■□□□□ 0.77
CCDC9-204ENST00000599398 LGALS3BPQ08380 585 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 MFSD13AQ14CX5 517 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 Q5PR19 223 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 SHEQ5VZ18 495 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 ERICH5Q6P6B1 374 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 KLHL17Q6TDP4 642 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 H1FNTQ75WM6 255 aaPredicted RBP19.85■□□□□ 0.77
CCDC9-204ENST00000599398 CCDC80Q76M96 950 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 LRRC75A-AS1Q8N1F1 130 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 C1orf162Q8NEQ5 155 aaPredicted RBP19.85■□□□□ 0.77
CCDC9-204ENST00000599398 OR4D11Q8NGI4 311 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 LILRB1Q8NHL6 650 aaPredicted RBP19.85■□□□□ 0.77
CCDC9-204ENST00000599398 PROX1Q92786 737 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 ALKBH3Q96Q83 286 aaPredicted RBP19.85■□□□□ 0.77
CCDC9-204ENST00000599398 C1QTNF6Q9BXI9 259 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 ASPNQ9BXN1 380 aa19.85■□□□□ 0.77
CCDC9-204ENST00000599398 OR6C65A6NJZ3 312 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 ABCD4O14678 606 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 CHP2O43745 196 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 CCDC22O60826 627 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 ZNF672Q499Z4 452 aaPredicted RBP19.84■□□□□ 0.77
CCDC9-204ENST00000599398 KLHL24Q6TFL4 600 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 TMEM108Q6UXF1 575 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 PIAS4Q8N2W9 510 aaPredicted RBP19.84■□□□□ 0.77
CCDC9-204ENST00000599398 C17orf78Q8N4C9 275 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 RP9Q8TA86 221 aaKnown RBP19.84■□□□□ 0.77
CCDC9-204ENST00000599398 ADAMTS16Q8TE57 1224 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 ZNF583Q96ND8 569 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 TMEM43Q9BTV4 400 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 AMBRA1Q9C0C7 1298 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 CXorf56Q9H5V9 222 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 SLC17A5Q9NRA2 495 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 B3GAT1Q9P2W7 334 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 LAMP3Q9UQV4 416 aa19.84■□□□□ 0.77
CCDC9-204ENST00000599398 M0R1B8 84 aa19.83■□□□□ 0.77
CCDC9-204ENST00000599398 FZD7O75084 574 aa19.83■□□□□ 0.77
CCDC9-204ENST00000599398 BGLAPP02818 100 aa19.83■□□□□ 0.77
CCDC9-204ENST00000599398 CRYBA2P53672 197 aa19.83■□□□□ 0.77
CCDC9-204ENST00000599398 VEZF1Q14119 521 aa19.83■□□□□ 0.77
CCDC9-204ENST00000599398 KRTAP1-3Q8IUG1 177 aa19.83■□□□□ 0.77
CCDC9-204ENST00000599398 WDR31Q8NA23 367 aa19.83■□□□□ 0.77
CCDC9-204ENST00000599398 OR6S1Q8NH40 331 aa19.83■□□□□ 0.77
CCDC9-204ENST00000599398 AMDHD2Q9Y303 409 aa19.83■□□□□ 0.77
CCDC9-204ENST00000599398 SH3GLB1Q9Y371 365 aa19.83■□□□□ 0.77
CCDC9-204ENST00000599398 CORINQ9Y5Q5 1042 aa19.83■□□□□ 0.77
CCDC9-204ENST00000599398 ALPK2Q86TB3 2170 aa19.83■□□□□ 0.76
CCDC9-204ENST00000599398 PLCE1Q9P212 2302 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 TRAPPC13A5PLN9 417 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 FAM220BPB1ANY3 271 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 UPK3AO75631 287 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 IFNA14P01570 189 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 COX4I1P13073 169 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 CDH11P55287 796 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 LTBQ06643 244 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 PMS2P3Q13401 168 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 SPATA21Q7Z572 469 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 UEVLDQ8IX04 471 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 ADPRHL1Q8NDY3 354 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 OR2T12Q8NG77 320 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 SMAP2Q8WU79 429 aaPredicted RBP19.82■□□□□ 0.76
CCDC9-204ENST00000599398 MOGAT1Q96PD6 335 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 ELAC2Q9BQ52 826 aaKnown RBP19.82■□□□□ 0.76
CCDC9-204ENST00000599398 FAM107BQ9H098 131 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 BAG5Q9UL15 447 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 SLC7A7Q9UM01 511 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 RCE1Q9Y256 329 aa19.82■□□□□ 0.76
CCDC9-204ENST00000599398 SHISA9B4DS77 424 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 LRRN3E7EW58 273 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 AKAP8O43823 692 aaKnown RBP19.81■□□□□ 0.76
CCDC9-204ENST00000599398 SLC43A1O75387 559 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 PTAFRP25105 342 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 PTH2RP49190 550 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 SEC24CP53992 1094 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 PRPS1P60891 318 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 RPS4XP62701 263 aaKnown RBP19.81■□□□□ 0.76
CCDC9-204ENST00000599398 SLC25A3Q00325 362 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 LRRC23Q53EV4 343 aaPredicted RBP19.81■□□□□ 0.76
CCDC9-204ENST00000599398 HIKESHIQ53FT3 197 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 HMBOX1Q6NT76 420 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 TTC33Q6PID6 262 aaPredicted RBP19.81■□□□□ 0.76
CCDC9-204ENST00000599398 SLC22A25Q6T423 547 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 LINC00114Q6XXX2 140 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 CARM1Q86X55 608 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 SCAIQ8N9R8 606 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 SLC41A3Q96GZ6 507 aa19.81■□□□□ 0.76
CCDC9-204ENST00000599398 GSX2Q9BZM3 304 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms