RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 COPZ1P61923 177 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 HOXC5Q00444 222 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 RASGEF1BQ0VAM2 473 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 PIN1Q13526 163 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-225ENST00000569245 TRIP10Q15642 601 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 ENTPD8Q5MY95 495 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 NUFIP2Q7Z417 695 aaKnown RBP12.87□□□□□ -0.35
COMMD4-225ENST00000569245 TSPYL5Q86VY4 417 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-225ENST00000569245 ADGRG3Q86Y34 549 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 OFCC1Q8IZS5 231 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 CADM2Q8N3J6 435 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 ZNF775Q96BV0 537 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-225ENST00000569245 EPYCQ99645 322 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 TACO1Q9BSH4 297 aaKnown RBP12.87□□□□□ -0.35
COMMD4-225ENST00000569245 FNDC11Q9BVV2 318 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 TRIM2Q9C040 744 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 OR11A1Q9GZK7 315 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 LIME1Q9H400 295 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 ANKRD19PQ9H560 264 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 REEP1Q9H902 201 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 NMNAT1Q9HAN9 279 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-225ENST00000569245 GP6Q9HCN6 339 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 LYVE1Q9Y5Y7 322 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 A0A1W2PRQ8 180 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 CPSF4LA6NMK7 179 aaKnown RBP12.86□□□□□ -0.35
COMMD4-225ENST00000569245 TNFRSF11BO00300 401 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 SMAD9O15198 467 aaKnown RBP12.86□□□□□ -0.35
COMMD4-225ENST00000569245 CYTIPO60759 359 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 HRGP04196 525 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 H1F0P07305 194 aaKnown RBP12.86□□□□□ -0.35
COMMD4-225ENST00000569245 FPR1P21462 350 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 DNASE1P24855 282 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 CXCR1P25024 350 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 CCKARP32238 428 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 PTDSS1P48651 473 aaKnown RBP12.86□□□□□ -0.35
COMMD4-225ENST00000569245 CLK1P49759 484 aaKnown RBP12.86□□□□□ -0.35
COMMD4-225ENST00000569245 ART1P52961 327 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 CDH12P55289 794 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 OR2B6P58173 313 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 TAS2R41P59536 307 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 SPIBQ01892 262 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 ST3GAL3Q11203 375 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 DGCR6Q14129 220 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 OR1Q1Q15612 314 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 OGFRL1Q5TC84 451 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-225ENST00000569245 ZNF613Q6PF04 617 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 SHQ1Q6PI26 577 aaKnown RBP12.86□□□□□ -0.35
COMMD4-225ENST00000569245 SVOPLQ8N434 492 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 OR4C15Q8NGM1 316 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 OR5K1Q8NHB7 308 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 ADAMTS16Q8TE57 1224 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 NRG4Q8WWG1 115 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 DDIT4LQ96D03 193 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 PIK3IP1Q96FE7 263 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 ARL5BQ96KC2 179 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 PRR14Q9BWN1 585 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 TMEM27Q9HBJ8 222 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 VNN3Q9NY84 501 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 ST6GALNAC2Q9UJ37 374 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 OSGIN1Q9UJX0 560 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 PLEKHA6Q9Y2H5 1048 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 HDGFL3Q9Y3E1 203 aa12.86□□□□□ -0.35
COMMD4-225ENST00000569245 SAMHD1Q9Y3Z3 626 aaKnown RBP12.86□□□□□ -0.35
COMMD4-225ENST00000569245 A0A0B4J2E0 115 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 A0A1B0GX12 115 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 TMEM72A0PK05 275 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 TRAPPC13A5PLN9 417 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 GADD45GO95257 159 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 PMS2P2O95744 297 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 PPP3CBP16298 524 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 KLK2P20151 261 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 ARHGDIAP52565 204 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 IST1P53990 364 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 TRAM2Q15035 370 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 WBP2NLQ6ICG8 309 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 ALKBH2Q6NS38 261 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 STAC2Q6ZMT1 411 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 TMEM179BQ7Z7N9 219 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 CXorf67Q86X51 503 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-225ENST00000569245 HIPK1Q86Z02 1210 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 EPHX4Q8IUS5 362 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 ICA1LQ8NDH6 482 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 SLC41A3Q96GZ6 507 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 PSD2Q9BQI7 771 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 FUZQ9BT04 418 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 C9orf16Q9BUW7 83 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 ACTR6Q9GZN1 396 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 MAN2C1Q9NTJ4 1040 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 EMC3Q9P0I2 261 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 RHCGQ9UBD6 479 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 OAZ3Q9UMX2 235 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 GPR52Q9Y2T5 361 aa12.85□□□□□ -0.35
COMMD4-225ENST00000569245 SAC3D1A6NKF1 404 aa12.84□□□□□ -0.35
COMMD4-225ENST00000569245 ZNF208O43345 1280 aa12.84□□□□□ -0.35
COMMD4-225ENST00000569245 E2F6O75461 281 aa12.84□□□□□ -0.35
COMMD4-225ENST00000569245 LYPD3O95274 346 aa12.84□□□□□ -0.35
COMMD4-225ENST00000569245 THY1P04216 161 aa12.84□□□□□ -0.35
COMMD4-225ENST00000569245 ZNF23P17027 643 aa12.84□□□□□ -0.35
COMMD4-225ENST00000569245 FUT4P22083 530 aa12.84□□□□□ -0.35
COMMD4-225ENST00000569245 CRYGSP22914 178 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms