RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 NXPE1Q8N323 547 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 C11orf42Q8N5U0 333 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 HORMAD2Q8N7B1 307 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 PI4KAP1Q8N8J0 262 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 C1orf127Q8N9H9 656 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 HPSE2Q8WWQ2 592 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 TMEM45BQ96B21 275 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 THOC3Q96J01 351 aaKnown RBP4.74□□□□□ -1.65
UBE4A-203ENST00000545354 LMLNQ96KR4 655 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 PWWP2AQ96N64 755 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 CNTNAP3BQ96NU0 1288 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 CRAMP1Q96RY5 1269 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 ZSCAN10Q96SZ4 725 aaPredicted RBP4.74□□□□□ -1.65
UBE4A-203ENST00000545354 ALG12Q9BV10 488 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 CNTNAP3Q9BZ76 1288 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 KATNBL1Q9H079 304 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 PLEKHA2Q9HB19 425 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 RAB18Q9NP72 206 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 MRM2Q9UI43 246 aaKnown RBP4.74□□□□□ -1.65
UBE4A-203ENST00000545354 FBXO4Q9UKT5 387 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 MRPS33Q9Y291 106 aaKnown RBP4.74□□□□□ -1.65
UBE4A-203ENST00000545354 PTGDR2Q9Y5Y4 395 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 HS3ST3A1Q9Y663 406 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 TRPM3Q9HCF6 1732 aaPredicted RBP4.74□□□□□ -1.65
UBE4A-203ENST00000545354 FLT4P35916 1363 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 TRAV26-1A0A087WT03 109 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 TCRBV3S1A0A5B6 114 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 NKX2-6A6NCS4 301 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 INMT-MINDY4F8WBC2 141 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 GFYI3L273 518 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 HRKO00198 91 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 AIREO43918 545 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 CA11O75493 328 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 TRUB2O95900 331 aaKnown RBP4.73□□□□□ -1.65
UBE4A-203ENST00000545354 KLKB1P03952 638 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 TK1P04183 234 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 ARG1P05089 322 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 TBC1D3HP0C7X1 549 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 ZSCAN5DPP0CG00 497 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 UBBP0CG47 229 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 IRF2P14316 349 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 GOT1P17174 413 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 RAB5AP20339 215 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 BRS3P32247 399 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 BSGP35613 385 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 COILP38432 576 aaPredicted RBP4.73□□□□□ -1.65
UBE4A-203ENST00000545354 ADCYAP1R1P41586 468 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 CKS1BP61024 79 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 RPS27AP62979 156 aaKnown RBP4.73□□□□□ -1.65
UBE4A-203ENST00000545354 UBA52P62987 128 aaKnown RBP4.73□□□□□ -1.65
UBE4A-203ENST00000545354 SUMO1P63165 101 aaKnown RBP4.73□□□□□ -1.65
UBE4A-203ENST00000545354 BAXQ07812 192 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 CRHR2Q13324 411 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 PGM5Q15124 567 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 NTRK3Q16288 839 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 ASTE1Q2TB18 679 aaPredicted RBP4.73□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF284Q2VY69 593 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 ELOA3BQ3SY89 546 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 MORN2Q502X0 79 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 C6orf141Q5SZD1 244 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 AGBL4Q5VU57 503 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 OTUD1Q5VV17 481 aaPredicted RBP4.73□□□□□ -1.65
UBE4A-203ENST00000545354 TMEM244Q5VVB8 128 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 SUSD4Q5VX71 490 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 OR2A2Q6IF42 318 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF770Q6IQ21 691 aaPredicted RBP4.73□□□□□ -1.65
UBE4A-203ENST00000545354 GDPGP1Q6ZNW5 385 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 TMPPEQ6ZT21 453 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 LARP4Q71RC2 724 aaKnown RBP eCLIP4.73□□□□□ -1.65
UBE4A-203ENST00000545354 SLC36A1Q7Z2H8 476 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 ANKRD33Q7Z3H0 272 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 RNF130Q86XS8 419 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 IZUMO1Q8IYV9 350 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 LRRC75A-AS1Q8N1F1 130 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 LINC00528Q8N1L1 170 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 TEX26Q8N6G2 289 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 C19orf47Q8N9M1 422 aaKnown RBP4.73□□□□□ -1.65
UBE4A-203ENST00000545354 ELOA3Q8NG57 546 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 OR4D9Q8NGE8 314 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 OR4P4Q8NGL7 312 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 OR10D4PQ8NGN7 298 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 OR1S1Q8NH92 325 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 NFKBIDQ8NI38 313 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 TMEM163Q8TC26 289 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 NETO1Q8TDF5 533 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 TNFAIP8L1Q8WVP5 186 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 SUSD6Q92537 303 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 GTPBP3Q969Y2 492 aaKnown RBP4.73□□□□□ -1.65
UBE4A-203ENST00000545354 FAM46BQ96A09 425 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 PTH2Q96A98 100 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 COA7Q96BR5 231 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 PYCR2Q96C36 320 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 NEDD4LQ96PU5 975 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 NPY6RQ99463 290 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 RSG1Q9BU20 258 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 SYT4Q9H2B2 425 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 CST9LQ9H4G1 147 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 WFDC1Q9HC57 220 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 SLAMF7Q9NQ25 335 aa4.73□□□□□ -1.65
UBE4A-203ENST00000545354 PXMP2Q9NR77 195 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms