RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 OPRM1P35372 400 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 SLC16A1P53985 500 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 RASGEF1BQ0VAM2 473 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 DGCR6Q14129 220 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 FAM214BQ7L5A3 538 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 ADGRG5Q8IZF4 528 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 CANT1Q8WVQ1 401 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 TMEM239Q8WW34 195 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 SLC25A36Q96CQ1 311 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 STARD4Q96DR4 205 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 MOGAT1Q96PD6 335 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 PIP5K1AQ99755 562 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 FUZQ9BT04 418 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 TRIM15Q9C019 465 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 RASSF1Q9NS23 344 aa16.12■□□□□ 0.17
VEGFA-222ENST00000520948 FAM32AQ9Y421 112 aaKnown RBP16.12■□□□□ 0.17
VEGFA-222ENST00000520948 A0A087WUU8 490 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 ZNF724A8MTY0 619 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 MT-ATP6P00846 226 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 YES1P07947 543 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 HOXB4P17483 251 aaPredicted RBP16.11■□□□□ 0.17
VEGFA-222ENST00000520948 GRPRP30550 384 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 LSM11P83369 360 aaKnown RBP eCLIP16.11■□□□□ 0.172e-28■■□□□ 11.6
VEGFA-222ENST00000520948 CHRNB3Q05901 458 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 SLC17A1Q14916 467 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 MFSD13AQ14CX5 517 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 ZNF74Q16587 644 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 OTUD3Q5T2D3 398 aaPredicted RBP16.11■□□□□ 0.17
VEGFA-222ENST00000520948 PPP4R4Q6NUP7 873 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 VWA1Q6PCB0 445 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 BTLAQ7Z6A9 289 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 TUSC5Q8IXB3 177 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 RNF113BQ8IZP6 322 aaKnown RBP16.11■□□□□ 0.17
VEGFA-222ENST00000520948 PIGXQ8TBF5 258 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 LIPHQ8WWY8 451 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 ZNF347Q96SE7 839 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 PLSCR4Q9NRQ2 329 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 KLHL9Q9P2J3 617 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 KLHL13Q9P2N7 655 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 CLEC4AQ9UMR7 237 aa16.11■□□□□ 0.17
VEGFA-222ENST00000520948 FAM221AA4D161 298 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 HTR3EA5X5Y0 456 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 LRRN3E7EW58 273 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 MS4A18H0YCH9 400 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 DVL2O14641 736 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 H1F0P07305 194 aaKnown RBP16.1■□□□□ 0.17
VEGFA-222ENST00000520948 RAP2AP10114 183 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 AGTR1P30556 359 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 HMGA2P52926 109 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 FOXD4Q12950 439 aaPredicted RBP16.1■□□□□ 0.17
VEGFA-222ENST00000520948 MS4A18Q3C1V0 323 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 FAM98BQ52LJ0 330 aaKnown RBP16.1■□□□□ 0.17
VEGFA-222ENST00000520948 NHLRC1Q6VVB1 395 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 SLC46A3Q7Z3Q1 461 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 CDC20BQ86Y33 519 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 PAPD5Q8NDF8 572 aaKnown RBP16.1■□□□□ 0.17
VEGFA-222ENST00000520948 ADPRHL1Q8NDY3 354 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 PFN4Q8NHR9 129 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 SLC7A13Q8TCU3 470 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 ACOT11Q8WXI4 607 aaPredicted RBP16.1■□□□□ 0.17
VEGFA-222ENST00000520948 TACO1Q9BSH4 297 aaKnown RBP16.1■□□□□ 0.17
VEGFA-222ENST00000520948 SF3B5Q9BWJ5 86 aaKnown RBP16.1■□□□□ 0.17
VEGFA-222ENST00000520948 KLHL4Q9C0H6 718 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 C20orf141Q9NUB4 165 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 MRPL39Q9NYK5 338 aaKnown RBP16.1■□□□□ 0.17
VEGFA-222ENST00000520948 SEC14L4Q9UDX3 406 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 B3GALT5Q9Y2C3 310 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 MED31Q9Y3C7 131 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 CORINQ9Y5Q5 1042 aa16.1■□□□□ 0.17
VEGFA-222ENST00000520948 HRNRQ86YZ3 2850 aaPredicted RBP16.09■□□□□ 0.17
VEGFA-222ENST00000520948 LOC102725191A0A1B0GVB3 256 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 A6NNC1 897 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 M0R082 166 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 VAMP5O95183 116 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 CH25HO95992 272 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 TSPAN19P0C672 248 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 ASAH2BP0C7U1 165 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 CD8BP10966 210 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 DNASE1P24855 282 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 NTF4P34130 210 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 LIMS1P48059 325 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 ASCL1P50553 236 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 CTBP2P56545 445 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 PRKCDQ05655 676 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 POU4F3Q15319 338 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 TBPL2Q6SJ96 375 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 H1FNTQ75WM6 255 aaPredicted RBP16.09■□□□□ 0.17
VEGFA-222ENST00000520948 NUFIP2Q7Z417 695 aaKnown RBP16.09■□□□□ 0.17
VEGFA-222ENST00000520948 ZIC4Q8N9L1 334 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 SCAIQ8N9R8 606 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 OR6K3Q8NGY3 331 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 ZNF417Q8TAU3 575 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 ZNF587Q96SQ5 575 aaPredicted RBP16.09■□□□□ 0.17
VEGFA-222ENST00000520948 PIGMQ9H3S5 423 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 GSX1Q9H4S2 264 aaPredicted RBP16.09■□□□□ 0.17
VEGFA-222ENST00000520948 FKRPQ9H9S5 495 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 FANCFQ9NPI8 374 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 RASD1Q9Y272 281 aa16.09■□□□□ 0.17
VEGFA-222ENST00000520948 DHRS12A0PJE2 317 aa16.08■□□□□ 0.16
VEGFA-222ENST00000520948 KPNA4O00629 521 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms