RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 SLC46A3Q7Z3Q1 461 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 GALNT5Q7Z7M9 940 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 CANT1Q8WVQ1 401 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 ZC3HAV1LQ96H79 300 aaKnown RBP9.86□□□□□ -0.83
APTX-230ENST00000494649 PIP5K1AQ99755 562 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 EMC6Q9BV81 110 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 LRMDAQ9H2I8 198 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 PLSCR4Q9NRQ2 329 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 GLRX2Q9NS18 164 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 MED29Q9NX70 200 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 JKAMPQ9P055 326 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 B3GAT1Q9P2W7 334 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 KLF2Q9Y5W3 355 aaPredicted RBP9.86□□□□□ -0.83
APTX-230ENST00000494649 HCFC1P51610 2035 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 CSMD2Q7Z408 3487 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 DCHS2Q6V1P9 2916 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 MS4A18H0YCH9 400 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 MSTNO14793 375 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 DNPH1O43598 174 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 MRPL33O75394 65 aaKnown RBP9.86□□□□□ -0.83
APTX-230ENST00000494649 ATP5HO75947 161 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 F13BP05160 661 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 SAGP10523 405 aaPredicted RBP9.86□□□□□ -0.83
APTX-230ENST00000494649 POU2F1P14859 743 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 RHCEP18577 417 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 CDH2P19022 906 aaPredicted RBP9.86□□□□□ -0.83
APTX-230ENST00000494649 MAKP20794 623 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 SELENOPP49908 381 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 FOXG1P55316 489 aaPredicted RBP9.86□□□□□ -0.83
APTX-230ENST00000494649 CLDN17P56750 224 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 C1DQ13901 141 aaKnown RBP9.86□□□□□ -0.83
APTX-230ENST00000494649 MS4A18Q3C1V0 323 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 NIPAL3Q6P499 406 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 IGFN1Q86VF2 1251 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 EPHX4Q8IUS5 362 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 WDFY1Q8IWB7 410 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 ZIC4Q8N9L1 334 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 BPIFA2Q96DR5 249 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 SGTBQ96EQ0 304 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 FAM46AQ96IP4 442 aaKnown RBP9.86□□□□□ -0.83
APTX-230ENST00000494649 PIGMQ9H3S5 423 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 IL1RAPQ9NPH3 570 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 EMC3Q9P0I2 261 aa9.86□□□□□ -0.83
APTX-230ENST00000494649 CENPEQ02224 2701 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 PKDREJQ9NTG1 2253 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 TRAV27A0A087WT01 109 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 RNF13O43567 381 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 LYZL6O75951 148 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 GADD45GO95257 159 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 ADAP00813 363 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 CD8BP10966 210 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 ZNF43P17038 809 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 CHRNB3Q05901 458 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 MELKQ14680 651 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 C5orf46Q6UWT4 87 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 C22orf34Q6ZV56 151 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 CREB3L2Q70SY1 520 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 RRM2BQ7LG56 351 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 AAED1Q7RTV5 226 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 NANOGNBQ7Z5D8 188 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 CXorf67Q86X51 503 aaPredicted RBP9.85□□□□□ -0.83
APTX-230ENST00000494649 PIK3C3Q8NEB9 887 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 OR13C2Q8NGS9 318 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 OR5J2Q8NH18 312 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 OR51A7Q8NH64 312 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 RNASE6Q93091 150 aaKnown RBP9.85□□□□□ -0.83
APTX-230ENST00000494649 APH1AQ96BI3 265 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 TXNDC15Q96J42 360 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 POLR2J2Q9GZM3 115 aaKnown RBP9.85□□□□□ -0.83
APTX-230ENST00000494649 POLR2J3Q9H1A7 115 aaKnown RBP9.85□□□□□ -0.83
APTX-230ENST00000494649 MUC13Q9H3R2 512 aa9.85□□□□□ -0.83
APTX-230ENST00000494649 IGKV3D-15A0A087WSY6 115 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 DHRS12A0PJE2 317 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 ZNF724A8MTY0 619 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 PLPP3O14495 311 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 CDC42EP2O14613 210 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 OR7A10O76100 309 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 OR6A2O95222 327 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 HIST1H2ABP04908 130 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 THRBP10828 461 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 ITGA2P17301 1181 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 DNAJA1P31689 397 aaKnown RBP9.84□□□□□ -0.83
APTX-230ENST00000494649 CCKARP32238 428 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 AQP2P41181 271 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 RBM34P42696 430 aaKnown RBP9.84□□□□□ -0.83
APTX-230ENST00000494649 SLC16A1P53985 500 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 PUDPQ08623 228 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 FAPQ12884 760 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 TRAP1Q12931 704 aaKnown RBP9.84□□□□□ -0.83
APTX-230ENST00000494649 FAM98BQ52LJ0 330 aaKnown RBP9.84□□□□□ -0.83
APTX-230ENST00000494649 TSPO2Q5TGU0 170 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 C1orf146Q5VVC0 180 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 HIST3H2AQ7L7L0 130 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 STK32CQ86UX6 486 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 UEVLDQ8IX04 471 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 ADGRG5Q8IZF4 528 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 MOSPD2Q8NHP6 518 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 ACOT11Q8WXI4 607 aaPredicted RBP9.84□□□□□ -0.83
APTX-230ENST00000494649 HIST1H2ACQ93077 130 aa9.84□□□□□ -0.83
APTX-230ENST00000494649 UTP4Q969X6 686 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms