RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 P3H2Q8IVL5 708 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 ZNF433Q8N7K0 673 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-213ENST00000460211 TPD52L3Q96J77 140 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 PCDHAC1Q9H158 963 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 ALG2Q9H553 416 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 PLEKHF2Q9H8W4 249 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 MALT1Q9UDY8 824 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 SLC7A7Q9UM01 511 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 USP22Q9UPT9 525 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 FREM1Q5H8C1 2179 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 DNHD1Q96M86 4753 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-213ENST00000460211 M0R082 166 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 CXCR6O00574 342 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 KLF4O43474 513 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 FZD7O75084 574 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 GMNNO75496 209 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 CBLP22681 906 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 EDNRAP25101 427 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 GRPRP30550 384 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 NTF4P34130 210 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 CRYBA2P53672 197 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 PMS2P3Q13401 168 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 TAB1Q15750 504 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 C8orf82Q6P1X6 216 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-213ENST00000460211 DEF8Q6ZN54 512 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 C22orf34Q6ZV56 151 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 ZIC4Q8N9L1 334 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 SCAIQ8N9R8 606 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 ADPRHL1Q8NDY3 354 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 OR4D11Q8NGI4 311 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 ZNF417Q8TAU3 575 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 SLC41A3Q96GZ6 507 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 ZNF385AQ96PM9 386 aaKnown RBP13.18□□□□□ -0.3
ATG4B-213ENST00000460211 ZNF587Q96SQ5 575 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-213ENST00000460211 KCTD14Q9BQ13 255 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-213ENST00000460211 SLC19A3Q9BZV2 496 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 SLCO5A1Q9H2Y9 848 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 ESRP2Q9H6T0 727 aaKnown RBP13.18□□□□□ -0.3
ATG4B-213ENST00000460211 SPAG4Q9NPE6 437 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 SLC7A10Q9NS82 523 aa13.18□□□□□ -0.3
ATG4B-213ENST00000460211 LOC102725191A0A1B0GVB3 256 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 OR5H1A6NKK0 313 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 NME4O00746 187 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 RAD51DO75771 328 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 OR5F1O95221 314 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 OR6A2O95222 327 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 RAF1P04049 648 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 HIST1H2ABP04908 130 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 MPGP29372 298 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 GSK3BP49841 420 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 MNAT1P51948 309 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 ADAM8P78325 824 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 PPA1Q15181 289 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 TSPO2Q5TGU0 170 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 GKAP1Q5VSY0 366 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-213ENST00000460211 NIPAL3Q6P499 406 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 PAMR1Q6UXH9 720 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 LINC00114Q6XXX2 140 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 HIST3H2AQ7L7L0 130 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 EPHX4Q8IUS5 362 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 UEVLDQ8IX04 471 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 KDM8Q8N371 416 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 HIST1H2ACQ93077 130 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 PLPPR2Q96GM1 343 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 CCT8L2Q96SF2 557 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 SMR3AQ99954 134 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 DLL4Q9NR61 685 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 NDE1Q9NXR1 346 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 ADA2Q9NZK5 511 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 TAGLN3Q9UI15 199 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 RCE1Q9Y256 329 aa13.17□□□□□ -0.3
ATG4B-213ENST00000460211 ZNF587BE7ETH6 402 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 SIAH2O43255 324 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 SLC43A1O75387 559 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 ZNF682O95780 498 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 BGLAPP02818 100 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 THRBP10828 461 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 HOXC12P31275 282 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 OR1E2P47887 323 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 CLDN17P56750 224 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 C1QTNF12Q5T7M4 302 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 FKBP9P1Q75LS8 142 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 LSRQ86X29 649 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-213ENST00000460211 ANKS4BQ8N8V4 417 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 C1orf162Q8NEQ5 155 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-213ENST00000460211 FAM162AQ96A26 154 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 HS6ST2Q96MM7 605 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 MUS81Q96NY9 551 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 MRPL39Q9NYK5 338 aaKnown RBP13.16□□□□□ -0.3
ATG4B-213ENST00000460211 ABCD2Q9UBJ2 740 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 RIMS3Q9UJD0 308 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 RPS6KA6Q9UK32 745 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 NOX1Q9Y5S8 564 aa13.16□□□□□ -0.3
ATG4B-213ENST00000460211 SHOX2O60902 331 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-213ENST00000460211 FAM107AO95990 144 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 CH25HO95992 272 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 IFNW1P05000 195 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 CD3EP07766 207 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 TNFRSF1BP20333 461 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms