RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ZNF160Q9HCG1 818 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 MEPEQ9NQ76 525 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 NANSQ9NR45 359 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 SERINC1Q9NRX5 453 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 SACM1LQ9NTJ5 587 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 C20orf141Q9NUB4 165 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 MRPS18AQ9NVS2 196 aaKnown RBP3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 C19orf73Q9NVV2 129 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 CHCHD3Q9NX63 227 aaKnown RBP3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 ERVK13-1Q9NX77 482 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 P4HTMQ9NXG6 502 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 TAS2R10Q9NYW0 307 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 FOXJ2Q9P0K8 574 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 ABI3Q9P2A4 366 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 ERVK-18Q9QC07 812 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 WARS2Q9UGM6 360 aaKnown RBP3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 KLHL21Q9UJP4 597 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF229Q9UJW7 825 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 OSGIN1Q9UJX0 560 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 FBXL4Q9UKA2 621 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 SIGLEC7Q9Y286 467 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMED7Q9Y3B3 224 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 WIF1Q9Y5W5 379 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 SPIN1Q9Y657 262 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 MYO15AQ9UKN7 3530 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 IGKV1D-42A0A075B6H8 117 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 TRAV20A0A0B4J274 112 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 PMS2P1A4D2B8 440 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 CCDC160A6NGH7 325 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 ENO4A6NNW6 628 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 CDRT15L2A8MXV6 281 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF99A8MXY4 864 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRR23D1E9PI22 279 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 H3BSA7 217 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 BHLHE40O14503 412 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 CDC42EP2O14613 210 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC30A4O14863 429 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 ARPC3O15145 178 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF208O43345 1280 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRKYO43930 277 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF354AO60765 605 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 CBR3O75828 277 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR6A2O95222 327 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 AHSA1O95433 338 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 NTN1O95631 604 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 RAB36O95755 333 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 FADS2O95864 444 aaKnown RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 CH25HO95992 272 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 MT-ND2P03891 347 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 P04436 131 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 CD14P08571 375 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 HTR1AP08908 422 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRR23D2P0DMB1 279 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 DBTP11182 482 aaKnown RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF3P17036 446 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRKCAP17252 672 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 MYL12AP19105 171 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 ACVR2AP27037 513 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 DCKP27707 260 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 HTR1FP30939 366 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 CASRP41180 1078 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 SOX3P41225 446 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC15A1P46059 708 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 CAPZA2P47755 286 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 MTNR1AP48039 350 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 NOVA1P51513 510 aaKnown RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 RRADP55042 308 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 GFRA1P56159 465 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 CLDN6P56747 220 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 SOX8P57073 446 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 RPS4XP62701 263 aaKnown RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 EMX1Q04741 257 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 AIMP2Q13155 320 aaKnown RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 PMS2P3Q13401 168 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 C1DQ13901 141 aaKnown RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 IRF3Q14653 427 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 RAB39AQ14964 217 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 TBCEQ15813 527 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF74Q16587 644 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 EMC4Q5J8M3 183 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 DCAF10Q5QP82 559 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 SYT6Q5T7P8 510 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 ABHD17BQ5VST6 288 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 C1orf140Q5VVS0 124 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 UBE2UQ5VVX9 321 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 XAF1Q6GPH4 301 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 ISLR2Q6UXK2 745 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 IL20RBQ6UXL0 311 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 B3GNT6Q6ZMB0 384 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 C16orf47Q6ZP98 133 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 MEPCEQ7L2J0 689 aaKnown RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 CXXC5Q7LFL8 322 aaKnown RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 NANOGNBQ7Z5D8 188 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 MEX3DQ86XN8 651 aaKnown RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 ADGRG3Q86Y34 549 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 PLCZ1Q86YW0 608 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 CLVS1Q8IUQ0 354 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 CCDC103Q8IW40 242 aa3.59□□□□□ -1.83
HMGB1P37-201ENST00000439613 IQCF1Q8N6M8 205 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms