RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 MPGP29372 298 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 SELENOPP49908 381 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 LTBQ06643 244 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 BSPH1Q075Z2 132 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 C9orf135Q5VTT2 229 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 C8orf82Q6P1X6 216 aaPredicted RBP17.86■□□□□ 0.45
GTF3A-202ENST00000419181 WDR88Q6ZMY6 472 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 SLC15A3Q8IY34 581 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 MICU2Q8IYU8 434 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 C1orf162Q8NEQ5 155 aaPredicted RBP17.86■□□□□ 0.45
GTF3A-202ENST00000419181 PROX1Q92786 737 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 PIGTQ969N2 578 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 OXGR1Q96P68 337 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 PIP5K1AQ99755 562 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 NSRP1Q9H0G5 558 aaKnown RBP17.86■□□□□ 0.45
GTF3A-202ENST00000419181 AP3M1Q9Y2T2 418 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 SH3GLB1Q9Y371 365 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 CORINQ9Y5Q5 1042 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 SLC25A15Q9Y619 301 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 ARID1AO14497 2285 aa17.86■□□□□ 0.45
GTF3A-202ENST00000419181 LOC102725191A0A1B0GVB3 256 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 ELOVL7A1L3X0 281 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 TRAPPC13A5PLN9 417 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 DPRXA6NFQ7 191 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 HS3ST1O14792 307 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 IFNA14P01570 189 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 CD3EP07766 207 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 ZNF43P17038 809 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 CBLP22681 906 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 KDELR2P33947 212 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 GYS2P54840 703 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 TGFBR3Q03167 851 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 ADAM5Q6NVV9 412 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 NIPAL3Q6P499 406 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 CARM1Q86X55 608 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 C17orf78Q8N4C9 275 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 SCAIQ8N9R8 606 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 LILRB1Q8NHL6 650 aaPredicted RBP17.85■□□□□ 0.45
GTF3A-202ENST00000419181 IGFBPL1Q8WX77 278 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 MOGAT1Q96PD6 335 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 CCL19Q99731 98 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 ZNF426Q9BUY5 554 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 EFCAB1Q9HAE3 211 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 SLC7A7Q9UM01 511 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 RCE1Q9Y256 329 aa17.85■□□□□ 0.45
GTF3A-202ENST00000419181 FLNAP21333 2647 aaKnown RBP17.85■□□□□ 0.45
GTF3A-202ENST00000419181 GMNCA6NCL1 334 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 OR6C65A6NJZ3 312 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 CLOCKO15516 846 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 ZNF432O94892 652 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 TNFRSF1BP20333 461 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 CLDN17P56750 224 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 LGALS3BPQ08380 585 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 HACD2Q6Y1H2 254 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 ABHD12BQ7Z5M8 362 aaPredicted RBP17.84■□□□□ 0.45
GTF3A-202ENST00000419181 CPLX4Q7Z7G2 160 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 ZNF611Q8N823 705 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 OR52N5Q8NH56 324 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 AKAP1Q92667 903 aaKnown RBP eCLIP17.84■□□□□ 0.45
GTF3A-202ENST00000419181 BOD1Q96IK1 185 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 MPP4Q96JB8 637 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 HOPXQ9BPY8 73 aaPredicted RBP17.84■□□□□ 0.45
GTF3A-202ENST00000419181 ASPNQ9BXN1 380 aa17.84■□□□□ 0.45
GTF3A-202ENST00000419181 GMPR2Q9P2T1 348 aaKnown RBP17.84■□□□□ 0.45
GTF3A-202ENST00000419181 ZNF469Q96JG9 3925 aaPredicted RBP17.83■□□□□ 0.44
GTF3A-202ENST00000419181 A0A1W2PR80 420 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 LRRN3E7EW58 273 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 MS4A18H0YCH9 400 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 NME4O00746 187 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 TRAF3IP2O43734 574 aaPredicted RBP17.83■□□□□ 0.44
GTF3A-202ENST00000419181 HPRP00739 348 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 MT-ATP6P00846 226 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 NUDT2P50583 147 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 SLC7A2P52569 658 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 LIPEQ05469 1076 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 C1DQ13901 141 aaKnown RBP17.83■□□□□ 0.44
GTF3A-202ENST00000419181 MS4A18Q3C1V0 323 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 LRRC23Q53EV4 343 aaPredicted RBP17.83■□□□□ 0.44
GTF3A-202ENST00000419181 CYBRD1Q53TN4 286 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 LINGO2Q7L985 606 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 TGIF2LYQ8IUE0 185 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 WDR31Q8NA23 367 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 ALKBH3Q96Q83 286 aaPredicted RBP17.83■□□□□ 0.44
GTF3A-202ENST00000419181 LINC00470Q9BZP3 86 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 SLC17A5Q9NRA2 495 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 MRPL39Q9NYK5 338 aaKnown RBP17.83■□□□□ 0.44
GTF3A-202ENST00000419181 MTORP42345 2549 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 ACANP16112 2415 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 PLCE1Q9P212 2302 aa17.83■□□□□ 0.44
GTF3A-202ENST00000419181 ALPK2Q86TB3 2170 aa17.82■□□□□ 0.44
GTF3A-202ENST00000419181 ZNF587BE7ETH6 402 aa17.82■□□□□ 0.44
GTF3A-202ENST00000419181 UPK3AO75631 287 aa17.82■□□□□ 0.44
GTF3A-202ENST00000419181 KRT33AO76009 404 aa17.82■□□□□ 0.44
GTF3A-202ENST00000419181 NQO1P15559 274 aaKnown RBP17.82■□□□□ 0.44
GTF3A-202ENST00000419181 HOXC12P31275 282 aa17.82■□□□□ 0.44
GTF3A-202ENST00000419181 ADAM8P78325 824 aa17.82■□□□□ 0.44
GTF3A-202ENST00000419181 C1QTNF12Q5T7M4 302 aa17.82■□□□□ 0.44
GTF3A-202ENST00000419181 TTC33Q6PID6 262 aaPredicted RBP17.82■□□□□ 0.44
GTF3A-202ENST00000419181 C10orf53Q8N6V4 93 aa17.82■□□□□ 0.44
GTF3A-202ENST00000419181 KBTBD8Q8NFY9 601 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms