RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 DNAJC22Q8N4W6 341 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 ZNF808Q8N4W9 903 aaPredicted RBP6.86□□□□□ -1.31
SH3D19-203ENST00000409598 GJC3Q8NFK1 279 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 ELP4Q96EB1 424 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 C3orf30Q96M34 536 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 ACPTQ9BZG2 426 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 KAT8Q9H7Z6 458 aaKnown RBP6.86□□□□□ -1.31
SH3D19-203ENST00000409598 DDX31Q9H8H2 851 aaKnown RBP6.86□□□□□ -1.31
SH3D19-203ENST00000409598 ZNF355PQ9NSJ1 428 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 PEX16Q9Y5Y5 336 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 CEPT1Q9Y6K0 416 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 TP73O15350 636 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 PLATP00750 562 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 ZNF44P15621 663 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 KDELR2P33947 212 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 CLDN6P56747 220 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 ZNF92Q03936 586 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 TUBA3CQ13748 450 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 RGNQ15493 299 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 RBM48Q5RL73 367 aaKnown RBP6.86□□□□□ -1.31
SH3D19-203ENST00000409598 MRPL2Q5T653 305 aaKnown RBP6.86□□□□□ -1.31
SH3D19-203ENST00000409598 ANKRD34AQ69YU3 496 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 MOB3CQ70IA8 216 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 ZNF627Q7L945 461 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 CLECL1Q8IZS7 167 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 OR5T2Q8NGG2 359 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 OXGR1Q96P68 337 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 TUBD1Q9UJT1 453 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 SPTA1P02549 2419 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 APC2O95996 2303 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 TNFSF11O14788 317 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 SPINT1O43278 529 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 EEDO75530 441 aaKnown RBP6.86□□□□□ -1.31
SH3D19-203ENST00000409598 MAP2K3P46734 347 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 TMBIM6P55061 237 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 MLLT10P55197 1068 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 PLET1Q6UQ28 207 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 DCDC5Q6ZRR9 648 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 PGAP1Q75T13 922 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 B3GNT8Q7Z7M8 397 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 NRMQ8IXM6 262 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 RNF113BQ8IZP6 322 aaKnown RBP6.86□□□□□ -1.31
SH3D19-203ENST00000409598 PIGCQ92535 297 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 PLK3Q9H4B4 646 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 PLEKHA6Q9Y2H5 1048 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 DLEC1Q9Y238 1755 aa6.86□□□□□ -1.31
SH3D19-203ENST00000409598 MEGF11A6BM72 1044 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 FAM172BPA6NC97 362 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 SLC16A7O60669 478 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 AZGP1P25311 298 aaKnown RBP6.85□□□□□ -1.31
SH3D19-203ENST00000409598 HTR6P50406 440 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 NKX2-5P52952 324 aaPredicted RBP6.85□□□□□ -1.31
SH3D19-203ENST00000409598 ACVR1Q04771 509 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 GINS1Q14691 196 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 OR1Q1Q15612 314 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 FOXB2Q5VYV0 432 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 RPS27LQ71UM5 84 aaKnown RBP6.85□□□□□ -1.31
SH3D19-203ENST00000409598 MDGA2Q7Z553 956 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 OR4K13Q8NH42 304 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 C16orf52Q8NHV5 167 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.85□□□□□ -1.31
SH3D19-203ENST00000409598 BEX2Q9BXY8 128 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 MYOZ1Q9NP98 299 aaPredicted RBP6.85□□□□□ -1.31
SH3D19-203ENST00000409598 MRPL39Q9NYK5 338 aaKnown RBP6.85□□□□□ -1.31
SH3D19-203ENST00000409598 TPRP12270 2363 aaKnown RBP6.85□□□□□ -1.31
SH3D19-203ENST00000409598 SLC19A2O60779 497 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 SORBS2O94875 1100 aaKnown RBP6.85□□□□□ -1.31
SH3D19-203ENST00000409598 IGHV3-9P01782 118 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 GKN3PP0CG01 181 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 CTSSP25774 331 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 SERPINF1P36955 418 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 B4GALNT1Q00973 533 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 PUDPQ08623 228 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 MICAQ29983 383 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 CCSMST1Q4G0I0 132 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 ZNF773Q6PK81 442 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 CCDC28AQ8IWP9 274 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 HMGCLL1Q8TB92 370 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 ADAMTS16Q8TE57 1224 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 INTS14Q96SY0 518 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 CSF3RQ99062 836 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 SLC26A1Q9H2B4 701 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 EXOSC1Q9Y3B2 195 aaKnown RBP6.85□□□□□ -1.31
SH3D19-203ENST00000409598 NME7Q9Y5B8 376 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 ZSCAN5BA6NJL1 495 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 LRRTM2O43300 516 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 CLDN14O95500 239 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 S100A9P06702 114 aaKnown RBP6.85□□□□□ -1.31
SH3D19-203ENST00000409598 YES1P07947 543 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 SNU13P55769 128 aaKnown RBP6.85□□□□□ -1.31
SH3D19-203ENST00000409598 RAB2AP61019 212 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 LRRC10Q5BKY1 277 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 PRAMEF17Q5VTA0 474 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 TMEM244Q5VVB8 128 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 CYP4V2Q6ZWL3 525 aaPredicted RBP6.85□□□□□ -1.31
SH3D19-203ENST00000409598 AHSA2Q719I0 299 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 SLC36A1Q7Z2H8 476 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 ELMOD2Q8IZ81 293 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 OR2M7Q8NG81 312 aa6.85□□□□□ -1.31
SH3D19-203ENST00000409598 ASB17Q8WXJ9 295 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms