RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 MARCH3Q86UD3 253 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 BEST3Q8N1M1 668 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 ARMC10Q8N2F6 343 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 TMCO5AQ8N6Q1 288 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 LRRC17Q8N6Y2 441 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 ASB15Q8WXK1 588 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 HGDQ93099 445 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 SH3YL1Q96HL8 342 aaPredicted RBP13.68□□□□□ -0.22
SCAF11-204ENST00000395454 DDOQ99489 341 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 KLHL21Q9UJP4 597 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 STUB1Q9UNE7 303 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 PIEZO2Q9H5I5 2752 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 PKD1L2Q7Z442 2459 aa13.68□□□□□ -0.22
SCAF11-204ENST00000395454 METTL15A6NJ78 407 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 MCIDASD6RGH6 385 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 F10P00742 488 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 PGCP20142 388 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 PSMA1P25786 263 aaKnown RBP13.67□□□□□ -0.22
SCAF11-204ENST00000395454 TACR3P29371 465 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 UQCRC1P31930 480 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 OPRL1P41146 370 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 P2RX1P51575 399 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 CCR4P51679 360 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 BDH1Q02338 343 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 TBR1Q16650 682 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 CD200R1LQ6Q8B3 271 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 LRRC75AQ8NAA5 344 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 OR5M3Q8NGP4 307 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 OR6Q1Q8NGQ2 317 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 DTNBP1Q96EV8 351 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 CHCHD6Q9BRQ6 235 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 MMP27Q9H306 513 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 ABI3Q9P2A4 366 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 TNFRSF10DQ9UBN6 386 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 SF3B6Q9Y3B4 125 aaKnown RBP13.67□□□□□ -0.22
SCAF11-204ENST00000395454 ITPR1Q14643 2758 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 CPAMD8Q8IZJ3 1885 aa13.67□□□□□ -0.22
SCAF11-204ENST00000395454 NPIPB7O75200 414 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 APOL3O95236 402 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 GAAP10253 952 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 PAICSP22234 425 aaKnown RBP13.66□□□□□ -0.22
SCAF11-204ENST00000395454 NOS3P29474 1203 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 TMED10P49755 219 aaKnown RBP13.66□□□□□ -0.22
SCAF11-204ENST00000395454 SUMO3P55854 103 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-204ENST00000395454 CBFBQ13951 182 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 GGTLC2Q14390 218 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 SOWAHCQ53LP3 525 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-204ENST00000395454 OR2G6Q5TZ20 316 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 LYPD8Q6UX82 237 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 IL20RBQ6UXL0 311 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 ACBD7Q8N6N7 88 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 OR9Q1Q8NGQ5 310 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 S100ZQ8WXG8 99 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 TTC9Q92623 222 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 TEAD3Q99594 435 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 TIMP4Q99727 224 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 NMNAT2Q9BZQ4 307 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 ZNF229Q9UJW7 825 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 LOC100506127A0A0U1RQW1 187 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 LRRN3E7EW58 273 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 ETV2O00321 342 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-204ENST00000395454 GNB5O14775 395 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 CEACAM4O75871 244 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 TXNDC12O95881 172 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 ITGB2P05107 769 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 FBXW4P57775 412 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 OC90Q02509 493 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-204ENST00000395454 POU4F2Q12837 409 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 ZNF468Q5VIY5 522 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-204ENST00000395454 OPN5Q6U736 354 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 SHFQ7M4L6 423 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 FAM122BQ7Z309 247 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 ADCK1Q86TW2 530 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 MFSD4AQ8N468 514 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 KLHL36Q8N4N3 616 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 SLC15A4Q8N697 577 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 GPR119Q8TDV5 335 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 SPACA9Q96E40 222 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-204ENST00000395454 ERMAPQ96PL5 475 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-204ENST00000395454 SECISBP2Q96T21 854 aaKnown RBP13.66□□□□□ -0.22
SCAF11-204ENST00000395454 CDADC1Q9BWV3 514 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 MED20Q9H944 212 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 FKRPQ9H9S5 495 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 ADGRL4Q9HBW9 690 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 HPF1Q9NWY4 346 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 B3GNT3Q9Y2A9 372 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 SLC6A5Q9Y345 797 aa13.66□□□□□ -0.22
SCAF11-204ENST00000395454 CAB39Q9Y376 341 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-204ENST00000395454 CLDN25C9JDP6 229 aa13.65□□□□□ -0.22
SCAF11-204ENST00000395454 ZNF670-ZNF695F2Z2N8 137 aa13.65□□□□□ -0.22
SCAF11-204ENST00000395454 IMPA2O14732 288 aa13.65□□□□□ -0.22
SCAF11-204ENST00000395454 WDPCPO95876 746 aa13.65□□□□□ -0.22
SCAF11-204ENST00000395454 CYB561P49447 251 aa13.65□□□□□ -0.22
SCAF11-204ENST00000395454 LTBQ06643 244 aa13.65□□□□□ -0.22
SCAF11-204ENST00000395454 ZNF404Q494X3 552 aa13.65□□□□□ -0.22
SCAF11-204ENST00000395454 LIPKQ5VXJ0 399 aa13.65□□□□□ -0.22
SCAF11-204ENST00000395454 ZNF322Q6U7Q0 402 aaPredicted RBP13.65□□□□□ -0.22
SCAF11-204ENST00000395454 ZNF563Q8TA94 476 aa13.65□□□□□ -0.22
SCAF11-204ENST00000395454 MOGAT1Q96PD6 335 aa13.65□□□□□ -0.22
SCAF11-204ENST00000395454 SH3GL3Q99963 347 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms