RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 SYT14Q8NB59 555 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 PIK3C3Q8NEB9 887 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 OR52P1PQ8NH57 321 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 MRPL24Q96A35 216 aaKnown RBP5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZBTB18Q99592 522 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 CCDC28BQ9BUN5 200 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 TAPBPLQ9BX59 468 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 PAIP1Q9H074 479 aaKnown RBP5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 GPR35Q9HC97 309 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 ATP23Q9Y6H3 246 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 IGHV2OR16-5A0A0B4J2B6 119 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 CFLARO15519 480 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 UBL3O95164 117 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 CECR9P0C854 216 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 UBTFL6P0CB48 400 aaPredicted RBP5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 NPR2P20594 1047 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 NR4A1P22736 598 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 SOAT1P35610 550 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 RFX3P48380 749 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 DSTNP60981 165 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 PGS1Q32NB8 556 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 PCGF3Q3KNV8 242 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 FAM69AQ5T7M9 428 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF613Q6PF04 617 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 C1QL2Q7Z5L3 287 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF525Q8N782 197 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 OR5AK3PQ8NH89 298 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 KCNK17Q96T54 332 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 ARHGDIGQ99819 225 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 C20orf27Q9GZN8 174 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 SLC7A8Q9UHI5 535 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF232Q9UNY5 417 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 SPEF1Q9Y4P9 236 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 NOX1Q9Y5S8 564 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 NOTCH2Q04721 2471 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 A0A087WUJ7 227 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 TRAV20A0A0B4J274 112 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 GMNCA6NCL1 334 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 PRORSD1PA6NEY8 169 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 SLU7O95391 586 aaKnown RBP5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 CRYAAP02489 173 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 ACHEP22303 614 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 CXCR1P25024 350 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 CHI3L1P36222 383 aaPredicted RBP5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 RBBP4Q09028 425 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 TAF11Q15544 211 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 SYPL1Q16563 259 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 SLC2A7Q6PXP3 512 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 RNF130Q86XS8 419 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 GOLGA6L1Q8N7Z2 621 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 SPATA5L1Q9BVQ7 753 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 C12orf65Q9H3J6 166 aaKnown RBP5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 CHODLQ9H9P2 273 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 SMURF2Q9HAU4 748 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 STX18Q9P2W9 335 aaKnown RBP5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 IGKV1D-42A0A075B6H8 117 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 FAM157AC9JC47 383 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 IGHMP01871 453 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 CD55P08174 381 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 GPX2P18283 190 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 SRD5A1P18405 259 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 CALCRP30988 508 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 STX3Q13277 289 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 FAM174BQ3ZCQ3 159 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 GPAT3Q53EU6 434 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 CCDC80Q76M96 950 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 PXKQ7Z7A4 578 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 TMEM99Q8N816 258 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 SLC38A5Q8WUX1 472 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 TLCD1Q96CP7 247 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 MSI2Q96DH6 328 aaKnown RBP5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF385AQ96PM9 386 aaKnown RBP5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 EPYCQ99645 322 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 C19orf24Q9BVV8 132 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 BEX2Q9BXY8 128 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 B3GAT2Q9NPZ5 323 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 GIMAP2Q9UG22 337 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 A0A0B4J2E0 115 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 A0A1B0GX12 115 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 ATP6V1G2-DDX39BF2Z307 99 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 NDUFS7O75251 213 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 RP2O75695 350 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 LYPD3O95274 346 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 AHSA1O95433 338 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 TFPIP10646 304 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 APEHP13798 732 aaKnown RBP5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF250P15622 560 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 LIMS1P48059 325 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 FOXG1P55316 489 aaPredicted RBP5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 PCBP3P57721 371 aaKnown RBP5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 CEACAM7Q14002 265 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 CHI3L2Q15782 390 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 ULK3Q6PHR2 472 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 H1FNTQ75WM6 255 aaPredicted RBP5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 SZRD1Q7Z422 152 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 HDDC2Q7Z4H3 204 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 OR6X1Q8NH79 312 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 UBASH3BQ8TF42 649 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 FAM216AQ8WUB2 273 aa5.38□□□□□ -1.55
SMARCAD1-203ENST00000394961 XAGE5Q8WWM1 108 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms