RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 VCXQ9H320 206 aa1.72□□□□□ -2.13
RNU6-48P-201ENST00000384161 SIAEQ9HAT2 523 aa1.72□□□□□ -2.13
RNU6-48P-201ENST00000384161 TM9SF3Q9HD45 589 aa1.72□□□□□ -2.13
RNU6-48P-201ENST00000384161 SMOXQ9NWM0 555 aa1.72□□□□□ -2.13
RNU6-48P-201ENST00000384161 THUMPD1Q9NXG2 353 aaKnown RBP1.72□□□□□ -2.13
RNU6-48P-201ENST00000384161 SLC25A37Q9NYZ2 338 aa1.72□□□□□ -2.13
RNU6-48P-201ENST00000384161 BFARQ9NZS9 450 aa1.72□□□□□ -2.13
RNU6-48P-201ENST00000384161 SEC14L3Q9UDX4 400 aa1.72□□□□□ -2.13
RNU6-48P-201ENST00000384161 ZNF223Q9UK11 482 aaPredicted RBP1.72□□□□□ -2.13
RNU6-48P-201ENST00000384161 TIMM10BQ9Y5J6 103 aa1.72□□□□□ -2.13
RNU6-48P-201ENST00000384161 LRP4O75096 1905 aa1.72□□□□□ -2.13
RNU6-48P-201ENST00000384161 TET2Q6N021 2002 aaPredicted RBP1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 PPIAL4EA0A075B759 164 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 TCRBV9S1A1TA0A576 114 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 TMX2-CTNND1H3BSU7 103 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 RIPK2O43353 540 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 GMFGO60234 142 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 OXSR1O95747 527 aaPredicted RBP1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 PLEKP08567 350 aaPredicted RBP1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 PPIAL4FP0DN26 164 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 HOXA9P31269 272 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 CCR1P32246 355 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 LONP1P36776 959 aaKnown RBP1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 NMUP48645 174 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 CASP4P49662 377 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 SPIBQ01892 262 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 OR5I1Q13606 314 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 PDK3Q15120 406 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 TAF7Q15545 349 aaPredicted RBP1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 LRRC23Q53EV4 343 aaPredicted RBP1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 CARD16Q5EG05 197 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 COA6Q5JTJ3 125 aaKnown RBP1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 OR2G6Q5TZ20 316 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 CTRB2Q6GPI1 263 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 Q6ZPB1 254 aaPredicted RBP1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 PGAP1Q75T13 922 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 TMEM123Q8N131 208 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 FAM133AQ8N9E0 248 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 STEAP2Q8NFT2 490 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 CMTM7Q96FZ5 175 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 COQ2Q96H96 371 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 TTC25Q96NG3 672 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 SLC39A3Q9BRY0 314 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 ACTR6Q9GZN1 396 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 DEFB127Q9H1M4 99 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 IFI27L2Q9H2X8 130 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 PATZ1Q9HBE1 687 aaKnown RBP1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 MRPL47Q9HD33 250 aaKnown RBP1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 GIN1Q9NXP7 522 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 QPCTLQ9NXS2 382 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 ZNF226Q9NYT6 803 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 CLCF1Q9UBD9 225 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 PRG3Q9Y2Y8 225 aaPredicted RBP1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 MEMO1Q9Y316 297 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 MYO10Q9HD67 2058 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 CARMIL3Q8ND23 1372 aa1.71□□□□□ -2.14
RNU6-48P-201ENST00000384161 PIKFYVEQ9Y2I7 2098 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 IGLV4-60A0A075B6I1 120 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 IGKV2-28A0A075B6P5 120 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 TRAV26-1A0A087WT03 109 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 C15orf38-AP3S2A0A0A6YYH1 394 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 NSG1A0A0A6YYJ2 146 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 GOLGA8SH3BPF8 625 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 PEX7O00628 323 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 MED6O75586 246 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 TNFSF13O75888 250 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 DIRAS1O95057 198 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 WISP3O95389 354 aaPredicted RBP1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 MOSP00540 346 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 IGKV2D-28P01615 120 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 MAGP20916 626 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 PCMT1P22061 227 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 HMGB2P26583 209 aaKnown RBP1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 GYG1P46976 350 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 DUSP3P51452 185 aaPredicted RBP1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 PAX5Q02548 391 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 PTCH1Q13635 1447 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 EBI3Q14213 229 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 KIAA0087Q14695 138 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 GNMTQ14749 295 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 UBE2SQ16763 222 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 DUSP7Q16829 419 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 RFX4Q33E94 735 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 FILIP1LQ4L180 1135 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 ZNF691Q5VV52 312 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 OR4F3Q6IEY1 312 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 ZNF621Q6ZSS3 439 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 PEX26Q7Z412 305 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 NUDCD3Q8IVD9 361 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 VSTM4Q8IW00 320 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 TMEM61Q8N0U2 210 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 VN1R2Q8NFZ6 395 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 OR4F15Q8NGB8 312 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 OR52H1Q8NGJ2 320 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 OR2G3Q8NGZ4 309 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 OR2T3Q8NH03 318 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 DTX3LQ8TDB6 740 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 ACER1Q8TDN7 264 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 GIMAP1Q8WWP7 306 aa1.7□□□□□ -2.14
RNU6-48P-201ENST00000384161 FGF14Q92915 247 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms