RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 ADGRD1Q6QNK2 874 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 CLIP4Q8N3C7 705 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 PYDC1Q8WXC3 89 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 LIN37Q96GY3 246 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF317Q96PQ6 595 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 CXCL16Q9H2A7 254 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 PIGMQ9H3S5 423 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 NOX3Q9HBY0 568 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ADAM29Q9UKF5 820 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 IER3IP1Q9Y5U9 82 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 CREBL2O60519 120 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF883P0CG24 379 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 VAMP1P23763 118 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 CEACAM3P40198 252 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 HOXA1P49639 335 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 INSM1Q01101 510 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 MXD1Q05195 221 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 TNFAIP8L3Q5GJ75 292 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 Q6ZNB5 142 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 OR6V1Q8N148 313 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF321PQ8N8H1 164 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 PTTG3PQ9NZH4 202 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF443Q9Y2A4 671 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 LOC100289279A0A1B0GTE1 492 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 A8MVM7 634 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 FAAHO00519 579 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 GPANK1O95872 356 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 TACR1P25103 407 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 PITPNBP48739 271 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 CSNK1G2P78368 415 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 C3AR1Q16581 482 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ARHGAP11BQ3KRB8 267 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 SLC35D2Q76EJ3 337 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 COMTD1Q86VU5 262 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 RBMXL3Q8N7X1 1067 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 CD200R1Q8TD46 325 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 LIPHQ8WWY8 451 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 OSBPL7Q9BZF2 842 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 QRSL1Q9H0R6 528 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 C8orf4Q9NR00 106 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 CHRNA9Q9UGM1 479 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 PRELID3BQ9Y3B1 194 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ACTL6AO96019 429 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 MT-CO2P00403 227 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 SP1P08047 785 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 LTB4RQ15722 352 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 GSG1Q2KHT4 349 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 NPSR1Q6W5P4 371 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 PAQR9Q6ZVX9 377 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ASCL5Q7RTU5 278 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 MDGA2Q7Z553 956 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 INTS14Q96SY0 518 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 MSX2P35548 267 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ETV5P41161 510 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 FXYD4P59646 89 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ACTA2P62736 377 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ACTG2P63267 376 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 UBE2UQ5VVX9 321 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 CROCCP3Q8IVE0 287 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 WDR31Q8NA23 367 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 TP53I13Q8NBR0 393 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 OR5W2Q8NH69 310 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 CORO2AQ92828 525 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 APIPQ96GX9 242 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 COQ10AQ96MF6 247 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 NSUN5Q96P11 429 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 CIB1Q99828 191 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF649Q9BS31 505 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 CXorf21Q9HAI6 301 aa8.45□□□□□ -1.06
LIMCH1-202ENST00000381753 NOBOXO60393 691 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 F13BP05160 661 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 SERPINE2P07093 398 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 FABP1P07148 127 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 CAPN3P20807 821 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 FXYD6P3P58550 94 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 ADAM17P78536 824 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 SLC10A2Q12908 348 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 GINS1Q14691 196 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 MICBQ29980 383 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 RPS26P11Q5JNZ5 115 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 GPR139Q6DWJ6 353 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 FAM26EQ8N5C1 309 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 SLC15A4Q8N697 577 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 TMEM239Q8WW34 195 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 ASB11Q8WXH4 323 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 GINS3Q9BRX5 216 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 FAM240BA0A1B0GVZ2 78 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 SLC2A1P11166 492 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 WNT7BP56706 349 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 MADCAM1Q13477 382 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 SLC25A35Q3KQZ1 300 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 OR2T27Q8NH04 317 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 SSUH2Q9Y2M2 353 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 PSAT1Q9Y617 370 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 THSD7AQ9UPZ6 1657 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 COL18A1P39060 1754 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 SCN11AQ9UI33 1791 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 SLC34A2O95436 690 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 CD22P20273 847 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms