RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 DNAJC27Q9NZQ0 273 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 SEC14L4Q9UDX3 406 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 CHRNA9Q9UGM1 479 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 ENPP5Q9UJA9 477 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 EXOGQ9Y2C4 368 aaKnown RBP11.95□□□□□ -0.5
SLIRP-201ENST00000238688 MAST4O15021 2626 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 TMED7-TICAM2A0A0A6YYA0 188 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 MASP2O00187 686 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 OIP5O43482 229 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 GABARAPO95166 117 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 AHSA1O95433 338 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 CD14P08571 375 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 IGFBP1P08833 259 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-201ENST00000238688 ADORA3P0DMS8 318 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 PRKCAP17252 672 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 UQCRC1P31930 480 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 MASP1P48740 699 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 NUDT6P53370 316 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 GP2P55259 537 aaKnown RBP11.94□□□□□ -0.5
SLIRP-201ENST00000238688 ACTC1P68032 377 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 ACTA1P68133 377 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 FHL1Q13642 323 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 SGCBQ16585 318 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 GLYR1Q49A26 553 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-201ENST00000238688 FAM205BPQ63HN1 556 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 NIPAL3Q6P499 406 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 GDPGP1Q6ZNW5 385 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 MEPCEQ7L2J0 689 aaKnown RBP11.94□□□□□ -0.5
SLIRP-201ENST00000238688 NANOGNBQ7Z5D8 188 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 P2RY8Q86VZ1 359 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 FADS6Q8N9I5 356 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 Q8NA96 180 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 POMGNT2Q8NAT1 580 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 ADPRHL1Q8NDY3 354 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 HAVCR2Q8TDQ0 301 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 TMIGD2Q96BF3 282 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 DDIT4LQ96D03 193 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 MRPL48Q96GC5 212 aaKnown RBP11.94□□□□□ -0.5
SLIRP-201ENST00000238688 SH3YL1Q96HL8 342 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-201ENST00000238688 ANGPTL4Q9BY76 406 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 CXorf56Q9H5V9 222 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 SH2D2AQ9NP31 389 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 ABI3Q9P2A4 366 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 TMED7Q9Y3B3 224 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 PCDHGB7Q9Y5F8 929 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 CHCHD2Q9Y6H1 151 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-201ENST00000238688 SVILO95425 2214 aa11.94□□□□□ -0.5
SLIRP-201ENST00000238688 ZGRF1Q86YA3 2104 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 CPAMD8Q8IZJ3 1885 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 PCNX3Q9H6A9 2034 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 TRAV27A0A087WT01 109 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 MYL12BO14950 172 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 SEC14L5O43304 696 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 SUSD5O60279 629 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 TRIM3O75382 744 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-201ENST00000238688 CH25HO95992 272 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 IGHA1P01876 353 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 STSP08842 583 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 CCNA2P20248 432 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 PSMB9P28065 219 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 C21orf33P30042 268 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-201ENST00000238688 OTX2P32243 289 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 SOX3P41225 446 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 CASP3P42574 277 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 BLVRAP53004 296 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 SLC25A1P53007 311 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 BDH1Q02338 343 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 EGR4Q05215 589 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 ACSM1Q08AH1 577 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 TIGD6Q17RP2 521 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 SLC22A10Q63ZE4 541 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 ADCK1Q86TW2 530 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 TMEM156Q8N614 296 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 RBMXL3Q8N7X1 1067 aaKnown RBP11.93□□□□□ -0.5
SLIRP-201ENST00000238688 OR10G3Q8NGC4 313 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 OR9Q1Q8NGQ5 310 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 OR52N1Q8NH53 320 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 OR51A7Q8NH64 312 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 MFSD8Q8NHS3 518 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 YIPF6Q96EC8 236 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 TMEM41AQ96HV5 264 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 FER1L6-AS2Q96M78 137 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 TNFRSF13CQ96RJ3 184 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 SMAD5Q99717 465 aaKnown RBP11.93□□□□□ -0.5
SLIRP-201ENST00000238688 ASPNQ9BXN1 380 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 SIAEQ9HAT2 523 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 ZNF160Q9HCG1 818 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 FANCFQ9NPI8 374 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 HPF1Q9NWY4 346 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 P4HTMQ9NXG6 502 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 MRPL39Q9NYK5 338 aaKnown RBP11.93□□□□□ -0.5
SLIRP-201ENST00000238688 FBXL4Q9UKA2 621 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 MOKQ9UQ07 419 aa11.93□□□□□ -0.5
SLIRP-201ENST00000238688 POLEQ07864 2286 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 NBPF19A0A087WUL8 3843 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 H3BMQ9 156 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 AHCYL1O43865 530 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 INMTO95050 263 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 IGHMP01871 453 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 BGLAPP02818 100 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms