RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TAS2R5Q9NYW4 299 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 TEKT2Q9UIF3 430 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 CORINQ9Y5Q5 1042 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 ASPMQ8IZT6 3477 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 FTCDNL1E5RQL4 147 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 SCG5P05408 212 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 CLUP10909 449 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 RGS6P49758 472 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 WNT4P56705 351 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.38■□□□□ 0.212e-13■□□□□ 9.3
VIM-201ENST00000224237 GPR139Q6DWJ6 353 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 IGF2-ASQ6U949 168 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 JAZF1Q86VZ6 243 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 LSM14AQ8ND56 463 aaKnown RBP16.38■□□□□ 0.21
VIM-201ENST00000224237 NPEPL1Q8NDH3 523 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 MFSD8Q8NHS3 518 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 TMEM41AQ96HV5 264 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 Q96M85 177 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 NMNAT3Q96T66 252 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 ASCL3Q9NQ33 180 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 DLL3Q9NYJ7 618 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 MRPL39Q9NYK5 338 aaKnown RBP16.38■□□□□ 0.21
VIM-201ENST00000224237 GRHPRQ9UBQ7 328 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 EML6Q6ZMW3 1958 aa16.38■□□□□ 0.21
VIM-201ENST00000224237 A0A1W2PPW3 197 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 J3QRE1 110 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 CCRL2O00421 344 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 SLC22A1O15245 554 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 DXOO77932 396 aaKnown RBP16.37■□□□□ 0.21
VIM-201ENST00000224237 P04436 131 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 LIMS3P0CW19 117 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 LIMS4P0CW20 117 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 NR4A1P22736 598 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 GTF2E2P29084 291 aaKnown RBP16.37■□□□□ 0.21
VIM-201ENST00000224237 LGALS3BPQ08380 585 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 POU4F2Q12837 409 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 NFATC3Q12968 1075 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 MLLT11Q13015 90 aaPredicted RBP16.37■□□□□ 0.21
VIM-201ENST00000224237 LCN1P1Q5VSP4 162 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 OR1J4Q8NGS1 313 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 ADAMTS14Q8WXS8 1223 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 ARL5BQ96KC2 179 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 FER1L6-AS2Q96M78 137 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 OPALINQ96PE5 141 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 DDOQ99489 341 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 DCUN1D5Q9BTE7 237 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 POTEKPQ9BYX7 375 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 SHISA8B8ZZ34 492 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 OR6A2O95222 327 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 GYPBP06028 91 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 FKBP2P26885 142 aaKnown RBP16.37■□□□□ 0.21
VIM-201ENST00000224237 CYB561P49447 251 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 AIMP2Q13155 320 aaKnown RBP16.37■□□□□ 0.21
VIM-201ENST00000224237 LEG1Q6P5S2 330 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 B3GLCTQ6Y288 498 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 MDGA2Q7Z553 956 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 BEST3Q8N1M1 668 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 SCAIQ8N9R8 606 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 OR9Q1Q8NGQ5 310 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 RELTQ969Z4 430 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 TSPAN32Q96QS1 320 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 SACM1LQ9NTJ5 587 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 ANKRD10Q9NXR5 420 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 SEC14L4Q9UDX3 406 aa16.37■□□□□ 0.21
VIM-201ENST00000224237 DOCK10Q96BY6 2186 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 OR6C68A6NDL8 312 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 H3BML4 177 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 RNF13O43567 381 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 SERPINI2O75830 405 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 TFPIP10646 304 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 LIFP15018 202 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 IDUAP35475 653 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 DSCR4P56555 118 aaPredicted RBP16.36■□□□□ 0.21
VIM-201ENST00000224237 SELENBP1Q13228 472 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 AQP6Q13520 282 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 TSTQ16762 297 aaKnown RBP16.36■□□□□ 0.21
VIM-201ENST00000224237 SLC35D3Q5M8T2 416 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 TIGD3Q6B0B8 471 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 ACBD7Q8N6N7 88 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 ATP6V1C2Q8NEY4 427 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 ZNF417Q8TAU3 575 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 SLC25A43Q8WUT9 341 aaPredicted RBP16.36■□□□□ 0.21
VIM-201ENST00000224237 DTNBP1Q96EV8 351 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 ZNF587Q96SQ5 575 aaPredicted RBP16.36■□□□□ 0.21
VIM-201ENST00000224237 NMNAT2Q9BZQ4 307 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 INPP5EQ9NRR6 644 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 INIPQ9NRY2 104 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 ERVK13-1Q9NX77 482 aa16.36■□□□□ 0.21
VIM-201ENST00000224237 C11orf98E9PRG8 122 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 PLPP3O14495 311 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 SBK2P0C263 348 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 AHCYP23526 432 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 CALRP27797 417 aaKnown RBP16.35■□□□□ 0.21
VIM-201ENST00000224237 NHLH1Q02575 133 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 KRR1Q13601 381 aaKnown RBP16.35■□□□□ 0.21
VIM-201ENST00000224237 DOC2BQ14184 412 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 OR7A5Q15622 319 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 TIMM50Q3ZCQ8 353 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 TMPRSS7Q7RTY8 843 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 LHFPL3Q86UP9 236 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms