RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 ADAM8P78325 824 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 TBCEQ15813 527 aaPredicted RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 NKG7Q16617 165 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 PRICKLE4Q2TBC4 344 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 STPG1Q5TH74 334 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 TMEM244Q5VVB8 128 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 SLX4IPQ5VYV7 408 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 KDM4DQ6B0I6 523 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 TMPRSS12Q86WS5 348 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 PLCZ1Q86YW0 608 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 SLC35F2Q8IXU6 374 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 MINDY2Q8NBR6 621 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 PSMA8Q8TAA3 256 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 ZNF566Q969W8 418 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 TM4SF19Q96DZ7 209 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 LHX9Q9NQ69 397 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 EXOSC3Q9NQT5 275 aaKnown RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 SNTG1Q9NSN8 517 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 C14orf119Q9NWQ9 140 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 PAK1IP1Q9NWT1 392 aaPredicted RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 LRFN1Q9P244 771 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 STUB1Q9UNE7 303 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 FNDC1Q4ZHG4 1894 aaPredicted RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 WDR81Q562E7 1941 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 PDCD11Q14690 1871 aaKnown RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 TRAV17A0A0B4J275 112 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 TRBV2A0A0J9YWF9 115 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 IGHV5-10-1A0A0J9YXX1 117 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 FABP12A6NFH5 140 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 SORBS2O94875 1100 aaKnown RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 CLIC3O95833 236 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 HPP00738 406 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 CHRM4P08173 479 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 ABOP16442 354 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 CA5AP35218 305 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 CARD18P57730 90 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 SNRPGP62308 76 aaKnown RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 GALK2Q01415 458 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 FGFBP1Q14512 234 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 MAPK11Q15759 364 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 DUSP7Q16829 419 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 GFOD2Q3B7J2 385 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 MRPL14Q6P1L8 145 aaKnown RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 KRT74Q7RTS7 529 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 ANKRD37Q7Z713 158 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 TMEM17Q86X19 198 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 GRAMD2AQ8IUY3 354 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 CLDN22Q8N7P3 220 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 POC5Q8NA72 575 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 C17orf47Q8NEP4 570 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 OR5L1Q8NGL2 311 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 CNOT9Q92600 299 aaKnown RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 HOXB13Q92826 284 aaPredicted RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 C11orf24Q96F05 449 aaPredicted RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 KCNJ15Q99712 375 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 ULBP2Q9BZM5 246 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 NXF5Q9H1B4 397 aaKnown RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 GPN1Q9HCN4 374 aaPredicted RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 MEPEQ9NQ76 525 aaPredicted RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 KLHL9Q9P2J3 617 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 GLS2Q9UI32 602 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 MBD1Q9UIS9 605 aaPredicted RBP5.07□□□□□ -1.6
CHD2-227ENST00000637572 B3GALT5Q9Y2C3 310 aa5.07□□□□□ -1.6
CHD2-227ENST00000637572 ANKUB1A6NFN9 424 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 VGLL3A8MV65 326 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 RGS9O75916 674 aaPredicted RBP5.06□□□□□ -1.6
CHD2-227ENST00000637572 GASTP01350 101 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 CRYABP02511 175 aaKnown RBP5.06□□□□□ -1.6
CHD2-227ENST00000637572 WNT1P04628 370 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 STSP08842 583 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 OR2T7P0C7T2 308 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 NAA10P41227 235 aaPredicted RBP5.06□□□□□ -1.6
CHD2-227ENST00000637572 RPS5P46782 204 aaKnown RBP5.06□□□□□ -1.6
CHD2-227ENST00000637572 MAN2A2P49641 1150 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 CCL11P51671 97 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 UCNP55089 124 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 CDH15P55291 814 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 TPTEP56180 551 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 EEF1A1P68104 462 aaKnown RBP5.06□□□□□ -1.6
CHD2-227ENST00000637572 POU3F1Q03052 451 aaPredicted RBP5.06□□□□□ -1.6
CHD2-227ENST00000637572 COL28A1Q2UY09 1125 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 ZNF404Q494X3 552 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 IDNKQ5T6J7 187 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 PRAMEF20Q5VT98 475 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 PLET1Q6UQ28 207 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 LINC00696Q6ZRV3 163 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 SYT9Q86SS6 491 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 MARCH3Q86UD3 253 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 LSM14AQ8ND56 463 aaKnown RBP5.06□□□□□ -1.6
CHD2-227ENST00000637572 OR1J2Q8NGS2 313 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 OR2T27Q8NH04 317 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 FAR1Q8WVX9 515 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 WDR77Q9BQA1 342 aaPredicted RBP5.06□□□□□ -1.6
CHD2-227ENST00000637572 TMED9Q9BVK6 235 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 RBM24Q9BX46 236 aaKnown RBP5.06□□□□□ -1.6
CHD2-227ENST00000637572 LHPPQ9H008 270 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 SLC38A1Q9H2H9 487 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 CDH20Q9HBT6 801 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 FAM60AQ9NP50 221 aa5.06□□□□□ -1.6
CHD2-227ENST00000637572 ACER3Q9NUN7 267 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms