RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 NOX1Q9Y5S8 564 aa11□□□□□ -0.65
TGFB1-204ENST00000600196 RP1L1Q8IWN7 2480 aaPredicted RBP11□□□□□ -0.65
TGFB1-204ENST00000600196 SHANK1Q9Y566 2161 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 SVILO95425 2214 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 A0A1W2PNR3 127 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 ENO4A6NNW6 628 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 CLCA1A8K7I4 914 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 PLPP3O14495 311 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 CASQ2O14958 399 aaPredicted RBP10.99□□□□□ -0.65
TGFB1-204ENST00000600196 AKAP8O43823 692 aaKnown RBP10.99□□□□□ -0.65
TGFB1-204ENST00000600196 IDH3BO43837 385 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 C1QL1O75973 258 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 WISP2O76076 250 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 OR6A2O95222 327 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 CNOT4O95628 575 aaKnown RBP10.99□□□□□ -0.65
TGFB1-204ENST00000600196 CH25HO95992 272 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 ANPEPP15144 967 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 CBLP22681 906 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 CEACAM8P31997 349 aaPredicted RBP10.99□□□□□ -0.65
TGFB1-204ENST00000600196 LTBQ06643 244 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 PMS2P3Q13401 168 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 SEC23BQ15437 767 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 OR7A5Q15622 319 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 ZBED5Q49AG3 693 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 C1QTNF12Q5T7M4 302 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 C1QL3Q5VWW1 255 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 FAM205BPQ63HN1 556 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 TMEM225Q6GV28 225 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 ABLIM2Q6H8Q1 611 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 PGBD2Q6P3X8 592 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 FAHD1Q6P587 224 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 TBPL2Q6SJ96 375 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 B3GNT6Q6ZMB0 384 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 RASSF6Q6ZTQ3 369 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 FCRLAQ7L513 359 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 PRICKLE2Q7Z3G6 844 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 SLC46A3Q7Z3Q1 461 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 OAFQ86UD1 273 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 UBQLNLQ8IYU4 475 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 PACRGLQ8N7B6 248 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 ATP6V1C2Q8NEY4 427 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 ANKK1Q8NFD2 765 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 SMPDL3BQ92485 455 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 GMPPAQ96IJ6 420 aaPredicted RBP10.99□□□□□ -0.65
TGFB1-204ENST00000600196 RDH12Q96NR8 316 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 GPX7Q96SL4 187 aaPredicted RBP10.99□□□□□ -0.65
TGFB1-204ENST00000600196 PKP2Q99959 881 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 RBM4BQ9BQ04 359 aaKnown RBP10.99□□□□□ -0.65
TGFB1-204ENST00000600196 RBM4Q9BWF3 364 aaKnown RBP10.99□□□□□ -0.65
TGFB1-204ENST00000600196 PRRG4Q9BZD6 226 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 TMEM185BQ9H7F4 350 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 RNPEPL1Q9HAU8 725 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 PARPBPQ9NWS1 579 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 IL20Q9NYY1 176 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 USE1Q9NZ43 259 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 EMC3Q9P0I2 261 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 PDP1Q9P0J1 537 aaPredicted RBP10.99□□□□□ -0.65
TGFB1-204ENST00000600196 BAIAP2Q9UQB8 552 aa10.99□□□□□ -0.65
TGFB1-204ENST00000600196 PRRC2CQ9Y520 2896 aaKnown RBP10.99□□□□□ -0.65
TGFB1-204ENST00000600196 ZFYVE26Q68DK2 2539 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 HSPB2A8KAH6 182 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 ANKRD65E5RJM6 399 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 IMPA2O14732 288 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 SMAD9O15198 467 aaKnown RBP10.98□□□□□ -0.65
TGFB1-204ENST00000600196 AHCYL1O43865 530 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 HPRP00739 348 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 IL2RAP01589 272 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 YES1P07947 543 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 ZNF23P17027 643 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 AGAP20933 346 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 TCEA1P23193 301 aaKnown RBP10.98□□□□□ -0.65
TGFB1-204ENST00000600196 SHC1P29353 583 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 GRPRP30550 384 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 UQCRC1P31930 480 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 P2RY4P51582 365 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 ESRRGP62508 458 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 HSF1Q00613 529 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 SRYQ05066 204 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 PUDPQ08623 228 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 SLC17A1Q14916 467 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 PON3Q15166 354 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 HSPB2Q16082 182 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 OTUD3Q5T2D3 398 aaPredicted RBP10.98□□□□□ -0.65
TGFB1-204ENST00000600196 HMBOX1Q6NT76 420 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 ZNF585AQ6P3V2 769 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 CD163Q86VB7 1156 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 ZGRF1Q86YA3 2104 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 C10orf53Q8N6V4 93 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 FNDC8Q8TC99 324 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 TMEM45BQ96B21 275 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 INTS12Q96CB8 462 aaKnown RBP10.98□□□□□ -0.65
TGFB1-204ENST00000600196 SLC25A36Q96CQ1 311 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 ADAD1Q96M93 576 aaKnown RBP10.98□□□□□ -0.65
TGFB1-204ENST00000600196 DMRTA2Q96SC8 542 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 FEVQ99581 238 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 TTYH2Q9BSA4 534 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 UCK2Q9BZX2 261 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 C20orf141Q9NUB4 165 aa10.98□□□□□ -0.65
TGFB1-204ENST00000600196 ZNF629Q9UEG4 869 aaPredicted RBP10.98□□□□□ -0.65
TGFB1-204ENST00000600196 SIGLEC7Q9Y286 467 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms