RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 P3H2Q8IVL5 708 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 CHERPQ8IWX8 916 aaKnown RBP9.56□□□□□ -0.88
SMAD4-214ENST00000592186 ATG16L2Q8NAA4 619 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 GALNT11Q8NCW6 608 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 ICA1LQ8NDH6 482 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 ADPRHL1Q8NDY3 354 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 PFN4Q8NHR9 129 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 WNT2BQ93097 391 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 EME1Q96AY2 570 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 BBC3Q96PG8 261 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-214ENST00000592186 FEVQ99581 238 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 TM9SF2Q99805 663 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 C9orf16Q9BUW7 83 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 DGCR6LQ9BY27 220 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 PRRG4Q9BZD6 226 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 GP6Q9HCN6 339 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 GLRX2Q9NS18 164 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 PNPLA3Q9NST1 481 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 C20orf141Q9NUB4 165 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 VNN3Q9NY84 501 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 ENOPH1Q9UHY7 261 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 SCOCQ9UIL1 159 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 OAZ3Q9UMX2 235 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 RASD1Q9Y272 281 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 TLN1Q9Y490 2541 aaKnown RBP9.56□□□□□ -0.88
SMAD4-214ENST00000592186 HEATR5AQ86XA9 2040 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 IGSF10Q6WRI0 2623 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 UNC119BA6NIH7 251 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 CD8B2A6NJW9 211 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 SLC22A20A6NK97 555 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 RCBTB2O95199 551 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 GASTP01350 101 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 MAKP20794 623 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 CBLP22681 906 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 GRPRP30550 384 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 RANBP1P43487 201 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 GSSP48637 474 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 IST1P53990 364 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 PRPS1P60891 318 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 LTBQ06643 244 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 ZP4Q12836 540 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 PPP1R8Q12972 351 aaKnown RBP9.56□□□□□ -0.88
SMAD4-214ENST00000592186 PDK3Q15120 406 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 RNPS1Q15287 305 aaKnown RBP9.56□□□□□ -0.88
SMAD4-214ENST00000592186 ZBED5Q49AG3 693 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 EEF1A1P5Q5VTE0 462 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 NSUN5P2Q63ZY6 315 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 OR2A2Q6IF42 318 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 RPL13AP3Q6NVV1 102 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 ZNF585AQ6P3V2 769 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 PGBD2Q6P3X8 592 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 ZBTB49Q6ZSB9 765 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 TMEM179BQ7Z7N9 219 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 ADGRE4PQ86SQ3 457 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 ZNF843Q8N446 348 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 AQP11Q8NBQ7 271 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 OR5M9Q8NGP3 310 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 OR5J2Q8NH18 312 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 MARVELD3Q96A59 401 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 FAM46AQ96IP4 442 aaKnown RBP9.56□□□□□ -0.88
SMAD4-214ENST00000592186 MOGAT1Q96PD6 335 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 RBM4BQ9BQ04 359 aaKnown RBP9.56□□□□□ -0.88
SMAD4-214ENST00000592186 TUBA1CQ9BQE3 449 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 RBM4Q9BWF3 364 aaKnown RBP9.56□□□□□ -0.88
SMAD4-214ENST00000592186 SF3B5Q9BWJ5 86 aaKnown RBP9.56□□□□□ -0.88
SMAD4-214ENST00000592186 UCK2Q9BZX2 261 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 GABARAPL1Q9H0R8 117 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 COQ10BQ9H8M1 238 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 FANCFQ9NPI8 374 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 KIF17Q9P2E2 1029 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 TNFRSF10DQ9UBN6 386 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 ORC6Q9Y5N6 252 aa9.56□□□□□ -0.88
SMAD4-214ENST00000592186 KALRNO60229 2985 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 AQP7P3A6NL99 342 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 CLCA1A8K7I4 914 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 H0YC42 278 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 BLOC1S5-TXNDC5H3BN57 136 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 PLPP3O14495 311 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 GPR171O14626 319 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 KLF4O43474 513 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 PIP5K1CO60331 668 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 PTP4A3O75365 173 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 AKR7A3O95154 331 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 PRKACGP22612 351 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 TPD52P55327 224 aaPredicted RBP9.55□□□□□ -0.88
SMAD4-214ENST00000592186 LSM11P83369 360 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMAD4-214ENST00000592186 TLE1Q04724 770 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 PON3Q15166 354 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 TRIP10Q15642 601 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 EIF2S3LQ2VIR3 472 aaKnown RBP9.55□□□□□ -0.88
SMAD4-214ENST00000592186 EMC4Q5J8M3 183 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 OTUD3Q5T2D3 398 aaPredicted RBP9.55□□□□□ -0.88
SMAD4-214ENST00000592186 TMEM211Q6ICI0 200 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 FAHD1Q6P587 224 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 RASSF6Q6ZTQ3 369 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 FCRLAQ7L513 359 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 SLC46A3Q7Z3Q1 461 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 P4HA3Q7Z4N8 544 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 NANOGNBQ7Z5D8 188 aa9.55□□□□□ -0.88
SMAD4-214ENST00000592186 PXKQ7Z7A4 578 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms