RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 CRISP3P54108 245 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 COPZ1P61923 177 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 TBRG1Q3YBR2 411 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 C1orf140Q5VVS0 124 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 CREB3L2Q70SY1 520 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 LINGO2Q7L985 606 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 OR1K1Q8NGR3 316 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 PROX1Q92786 737 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 VPS33AQ96AX1 596 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 BOD1Q96IK1 185 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 ALKBH3Q96Q83 286 aaPredicted RBP14.2□□□□□ -0.14
MBD3-206ENST00000589901 TPT1P8Q9HAU6 139 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 TMEM45AQ9NWC5 275 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 CALML5Q9NZT1 146 aa14.2□□□□□ -0.14
MBD3-206ENST00000589901 HMGB1P1B2RPK0 211 aaPredicted RBP14.19□□□□□ -0.14
MBD3-206ENST00000589901 NR5A2O00482 541 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 PHF1O43189 567 aaPredicted RBP14.19□□□□□ -0.14
MBD3-206ENST00000589901 NPIPB7O75200 414 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 ANP32DO95626 131 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 IDO1P14902 403 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 ZNF16P17020 682 aaPredicted RBP14.19□□□□□ -0.14
MBD3-206ENST00000589901 NCF2P19878 526 aaPredicted RBP14.19□□□□□ -0.14
MBD3-206ENST00000589901 USF1P22415 310 aaPredicted RBP14.19□□□□□ -0.14
MBD3-206ENST00000589901 DSTNP60981 165 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 TUBA1BP68363 451 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 TUBA4AP68366 448 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 SLC9B1Q4ZJI4 515 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 PDCD4Q53EL6 469 aaKnown RBP14.19□□□□□ -0.14
MBD3-206ENST00000589901 C1QTNF12Q5T7M4 302 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 RNF220Q5VTB9 566 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 CYB5R2Q6BCY4 276 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 TUBA1AQ71U36 451 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 ABHD12BQ7Z5M8 362 aaPredicted RBP14.19□□□□□ -0.14
MBD3-206ENST00000589901 SERPINA11Q86U17 422 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 EPHX4Q8IUS5 362 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 C3orf49Q96BT1 292 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 TMEM19Q96HH6 336 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 SORCS2Q96PQ0 1159 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 SLC38A2Q96QD8 506 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 BEX2Q9BXY8 128 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 PIF1Q9H611 641 aa14.19□□□□□ -0.14
MBD3-206ENST00000589901 A0A096LPE4 126 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 A0A1W2PPZ6 126 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 TMEM229AB2RXF0 380 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 ZNF587BE7ETH6 402 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 UPK3AO75631 287 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 VAMP5O95183 116 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 CSF3P09919 207 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 NUDT7P0C024 238 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 ZCCHC18P0CG32 403 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 STX1BP61266 288 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 LSM11P83369 360 aaKnown RBP eCLIP14.18□□□□□ -0.14
MBD3-206ENST00000589901 HOXC5Q00444 222 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 LARS2Q15031 903 aaKnown RBP14.18□□□□□ -0.14
MBD3-206ENST00000589901 PRAMEF8Q5VWM4 474 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 PRAMEF7Q5VXH5 474 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 NIPAL3Q6P499 406 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 MAVSQ7Z434 540 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 KDM8Q8N371 416 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 ARIH2OSQ8N7S6 290 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 OR9I1Q8NGQ6 314 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 TMEM158Q8WZ71 300 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 BCL2L2Q92843 193 aaPredicted RBP14.18□□□□□ -0.14
MBD3-206ENST00000589901 SPATA9Q9BWV2 254 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 VIPAS39Q9H9C1 493 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 OBP2BQ9NPH6 170 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 CA10Q9NS85 328 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 TMEM160Q9NX00 188 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 PRDM4Q9UKN5 801 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 ZNF232Q9UNY5 417 aa14.18□□□□□ -0.14
MBD3-206ENST00000589901 VWC2LB2RUY7 222 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 FTCDNL1E5RQL4 147 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 SERPINF1P36955 418 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 UBE2NP61088 152 aaKnown RBP14.17□□□□□ -0.14
MBD3-206ENST00000589901 SNRPD2P62316 118 aaKnown RBP14.17□□□□□ -0.14
MBD3-206ENST00000589901 GGTLC2Q14390 218 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 ANKRD16Q6P6B7 361 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 VHLLQ6RSH7 139 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 ANKS4BQ8N8V4 417 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 SLC25A36Q96CQ1 311 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 ITCHQ96J02 903 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 MAELQ96JY0 434 aaKnown RBP14.17□□□□□ -0.14
MBD3-206ENST00000589901 OR52B2Q96RD2 323 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 KCNS3Q9BQ31 491 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 KATNB1Q9BVA0 655 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 PTDSS2Q9BVG9 487 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 NELFAQ9H3P2 528 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 RMND5AQ9H871 391 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 SEC61A2Q9H9S3 476 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 SDR39U1Q9NRG7 319 aaPredicted RBP14.17□□□□□ -0.14
MBD3-206ENST00000589901 SEC14L4Q9UDX3 406 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 RASD1Q9Y272 281 aa14.17□□□□□ -0.14
MBD3-206ENST00000589901 A0A096LPI6 279 aa14.16□□□□□ -0.14
MBD3-206ENST00000589901 ARPC4-TTLL3A0A0A6YYG9 625 aa14.16□□□□□ -0.14
MBD3-206ENST00000589901 A0A0G2JPF8 293 aa14.16□□□□□ -0.14
MBD3-206ENST00000589901 HNRNPCL2B2RXH8 293 aa14.16□□□□□ -0.14
MBD3-206ENST00000589901 HNRNPCL3B7ZW38 293 aa14.16□□□□□ -0.14
MBD3-206ENST00000589901 UBDO15205 165 aa14.16□□□□□ -0.14
MBD3-206ENST00000589901 POLR3GO15318 223 aaPredicted RBP14.16□□□□□ -0.14
MBD3-206ENST00000589901 HNRNPCL1O60812 293 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms