RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 TMEM247A6NEH6 219 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 A8MVM7 634 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 FAAHO00519 579 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 AHSA1O95433 338 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 F12P00748 615 aaPredicted RBP11.95□□□□□ -0.5
HDAC5-208ENST00000588419 CRYAAP02489 173 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 PRG2P13727 222 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 SRD5A1P18405 259 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 IGFBP5P24593 272 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 GZMKP49863 264 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 CRISP3P54108 245 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 TXNL4AP83876 142 aaKnown RBP11.95□□□□□ -0.5
HDAC5-208ENST00000588419 LARS2Q15031 903 aaKnown RBP11.95□□□□□ -0.5
HDAC5-208ENST00000588419 GSTA3Q16772 222 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 GTDC1Q4AE62 458 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 C6orf10Q5SRN2 563 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 C1orf140Q5VVS0 124 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 FAM166AQ6J272 317 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 KDM8Q8N371 416 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 ZIC4Q8N9L1 334 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 TMEM19Q96HH6 336 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 SF3B5Q9BWJ5 86 aaKnown RBP11.95□□□□□ -0.5
HDAC5-208ENST00000588419 ADAM19Q9H013 955 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 SEC61A2Q9H9S3 476 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 SSU72Q9NP77 194 aaKnown RBP11.95□□□□□ -0.5
HDAC5-208ENST00000588419 CALML5Q9NZT1 146 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 HAO1Q9UJM8 370 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 UPK3AO75631 287 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 ACAA2P42765 397 aaKnown RBP11.94□□□□□ -0.5
HDAC5-208ENST00000588419 NR4A2P43354 598 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 RPS5P46782 204 aaKnown RBP11.94□□□□□ -0.5
HDAC5-208ENST00000588419 CAPZA2P47755 286 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 MAP2K6P52564 334 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 CLDN17P56750 224 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 HOXC5Q00444 222 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 LRRC74AQ0VAA2 488 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 NPRL3Q12980 569 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 MPP2Q14168 576 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 MAPK11Q15759 364 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 KRTAP24-1Q3LI83 254 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 WDR93Q6P2C0 686 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 CREB3L2Q70SY1 520 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 LINGO2Q7L985 606 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 SERPINA11Q86U17 422 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 CLIP4Q8N3C7 705 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 CA10Q9NS85 328 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 GPR45Q9Y5Y3 372 aa11.94□□□□□ -0.5
HDAC5-208ENST00000588419 IGHV4-61A0A0C4DH41 118 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 SLC35F4A4IF30 521 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 TRPC5OSA6NMA1 111 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 SLC22A3O75751 556 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 SEC14L2O76054 403 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 CELA3BP08861 270 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 OR4A8P0C604 315 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 CECR9P0C854 216 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 PNMTP11086 282 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 CBLP22681 906 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 SERPINF1P36955 418 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 ROR2Q01974 943 aaKnown RBP11.93□□□□□ -0.5
HDAC5-208ENST00000588419 NAAAQ02083 359 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 SWI5Q1ZZU3 235 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 MST1LQ2TV78 715 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 ZNF311Q5JNZ3 666 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 RNF220Q5VTB9 566 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 AP1ARQ63HQ0 302 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 MREGQ8N565 214 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 GLB1L3Q8NCI6 653 aaPredicted RBP11.93□□□□□ -0.5
HDAC5-208ENST00000588419 RNF217Q8TC41 542 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 SLC38A5Q8WUX1 472 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 FOXN4Q96NZ1 517 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 KATNB1Q9BVA0 655 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 PRR14Q9BWN1 585 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 BPESC1Q9GZL8 116 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 ARMC7Q9H6L4 198 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 RMND5AQ9H871 391 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 TPT1P8Q9HAU6 139 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 OBP2BQ9NPH6 170 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 TMEM160Q9NX00 188 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 RPS6KB2Q9UBS0 482 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 SEC14L4Q9UDX3 406 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 ZNF232Q9UNY5 417 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 RASD1Q9Y272 281 aa11.93□□□□□ -0.5
HDAC5-208ENST00000588419 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.93□□□□□ -0.51e-6■■■□□ 15.2
HDAC5-208ENST00000588419 MXRA5Q9NR99 2828 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 DSPPQ9NZW4 1301 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 SH3PXD2BA1X283 911 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 HAX1O00165 279 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 HDAC3O15379 428 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 IL6P05231 212 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 TFPTP0C1Z6 253 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 IDO1P14902 403 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 ZNF43P17038 809 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 HNF1AP20823 631 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 CALCRP30988 508 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 IDH3GP51553 393 aaPredicted RBP11.92□□□□□ -0.5
HDAC5-208ENST00000588419 P2RY4P51582 365 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 C1DQ13901 141 aaKnown RBP11.92□□□□□ -0.5
HDAC5-208ENST00000588419 ADIPOQQ15848 244 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 SLC9B1Q4ZJI4 515 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 PDCD4Q53EL6 469 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms