RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 PPIAL4DF5H284 164 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 TIMM23O14925 209 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 ABHD2P08910 425 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 PPIAL4FP0DN26 164 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 GLRXP35754 106 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 PGM1P36871 562 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 SEC24CP53992 1094 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 OTUD3Q5T2D3 398 aaPredicted RBP11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 EMBQ6PCB8 327 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 ANKK1Q8NFD2 765 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 OR56A1Q8NGH5 318 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 PSMA8Q8TAA3 256 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 OIT3Q8WWZ8 545 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 PMM1Q92871 262 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 LINC00470Q9BZP3 86 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 RRAGDQ9NQL2 400 aaPredicted RBP11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 SH3BP4Q9P0V3 963 aa11.82□□□□□ -0.52
CSNK1D-219ENST00000581660 AQP7P3A6NL99 342 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 TMEM229AB2RXF0 380 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 AKAP10O43572 662 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 UGT2B17O75795 530 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 KNG1P01042 644 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 HTR3AP46098 478 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 SELENOPP49908 381 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 MAP2K6P52564 334 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 C17orf107Q6ZR85 190 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 C1QL4Q86Z23 238 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 SLC22A9Q8IVM8 553 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 ZNF563Q8TA94 476 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 DDIT4LQ96D03 193 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 MTERF3Q96E29 417 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 RBM4BQ9BQ04 359 aaKnown RBP11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 SYT3Q9BQG1 590 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 RHOXF2Q9BQY4 288 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 TXLNGYQ9BZA5 131 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 CRLF2Q9HC73 371 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 SLC35A3Q9Y2D2 325 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 DNAH3Q8TD57 4116 aa11.81□□□□□ -0.52
CSNK1D-219ENST00000581660 NUP214P35658 2090 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 TMED7-TICAM2A0A0A6YYA0 188 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 RPL36A-HNRNPH2H7BZ11 118 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 FCMRO60667 390 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 BCAS1O75363 584 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 SEC22BO75396 215 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 STX11O75558 287 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 SKAP2O75563 359 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 UPK3AO75631 287 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 AK1P00568 194 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 SHBGP04278 402 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 BCKDHAP12694 445 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 SDC1P18827 310 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 EFNA1P20827 205 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 CCT3P49368 545 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 ATP4BP51164 291 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 MVKQ03426 396 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 NPRL3Q12980 569 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 TP53BP2Q13625 1128 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 MAD2L1BPQ15013 274 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 FXNQ16595 210 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 KLF17Q5JT82 389 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 ZNF362Q5T0B9 420 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 AVPI1Q5T686 147 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 CLEC6AQ6EIG7 209 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 Q6ZPA2 131 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 TRMT10CQ7L0Y3 403 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 MDP1Q86V88 176 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 RETREG3Q86VR2 466 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 TREML1Q86YW5 311 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 CCDC36Q8IYA8 594 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 BCL6BQ8N143 479 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 TMEM99Q8N816 258 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 DEFB108BQ8NET1 73 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 UBE2FQ969M7 185 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 TSSK3Q96PN8 268 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 OR7D2Q96RA2 312 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 ZNF350Q9GZX5 532 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 SERHL2Q9H4I8 314 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.8□□□□□ -0.528e-7■■■■□ 19.3
CSNK1D-219ENST00000581660 EXOSC3Q9NQT5 275 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 MYEF2Q9P2K5 600 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 PSMC3IPQ9P2W1 217 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 TESQ9UGI8 421 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 ZNF346Q9UL40 294 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 TMED7Q9Y3B3 224 aa11.8□□□□□ -0.52
CSNK1D-219ENST00000581660 TMEM72A0PK05 275 aa11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 LIPT2A6NK58 231 aa11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 SCAMP2O15127 329 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 PIN1P1O15428 100 aa11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 PROCP04070 461 aa11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 MYL2P10916 166 aa11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 NAT2P11245 290 aa11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 ZNF35P13682 527 aa11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 CCNA2P20248 432 aa11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 OMGP23515 440 aa11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 P2RY4P51582 365 aa11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 ARF1P84077 181 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 ROR2Q01974 943 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 PLAURQ03405 335 aa11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 GPR68Q15743 365 aa11.79□□□□□ -0.52
CSNK1D-219ENST00000581660 MAPK14Q16539 360 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms