RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 NR5A2O00482 541 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 WNT11O96014 354 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 ARAFP10398 606 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 PRKAR1BP31321 381 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 RPS5P46782 204 aaKnown RBP13.91□□□□□ -0.18
CRLF3-203ENST00000578692 FABP6P51161 128 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 SLC25A3Q00325 362 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 CDK6Q00534 326 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 EGR4Q05215 589 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 NRF1Q16656 503 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 ELOA3BQ3SY89 546 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 AGKQ53H12 422 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 TTMPQ5BVD1 217 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 GCNT6Q5T4J0 391 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 REEP3Q6NUK4 255 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 DNM1P46Q6ZS02 220 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 C10orf111Q8N326 155 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 MUC15Q8N387 334 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 ELOA3Q8NG57 546 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 BOD1Q96IK1 185 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 ADAD1Q96M93 576 aaKnown RBP13.91□□□□□ -0.18
CRLF3-203ENST00000578692 SPATA5L1Q9BVQ7 753 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 RSPO3Q9BXY4 272 aaPredicted RBP13.91□□□□□ -0.18
CRLF3-203ENST00000578692 FKRPQ9H9S5 495 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 TMEM45AQ9NWC5 275 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 GMEB1Q9Y692 573 aa13.91□□□□□ -0.18
CRLF3-203ENST00000578692 FTCDNL1E5RQL4 147 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 SSX4O60224 188 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 GPX2P18283 190 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 SELENOPP49908 381 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 ATP4BP51164 291 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 IRX1P78414 480 aaPredicted RBP13.9□□□□□ -0.18
CRLF3-203ENST00000578692 C11orf71Q6IPW1 123 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 NIPAL3Q6P499 406 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 KLHL24Q6TFL4 600 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 B3GLCTQ6Y288 498 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 KRT73Q86Y46 540 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 EPHX4Q8IUS5 362 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 KDM8Q8N371 416 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 LSMEM1Q8N8F7 131 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 PTDSS2Q9BVG9 487 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 CACNG6Q9BXT2 260 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 C12orf10Q9HB07 376 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 ATP23Q9Y6H3 246 aa13.9□□□□□ -0.18
CRLF3-203ENST00000578692 HEATR1Q9H583 2144 aaKnown RBP13.9□□□□□ -0.18
CRLF3-203ENST00000578692 TRBV5-3A0A0A0MS03 114 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 OR6C65A6NJZ3 312 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 EVPLLA8MZ36 301 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 OR2T1O43869 369 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 TPST1O60507 370 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 PNMTP11086 282 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 GTF2E2P29084 291 aaKnown RBP13.89□□□□□ -0.19
CRLF3-203ENST00000578692 LGALS3BPQ08380 585 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 RAB35Q15286 201 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 HIKESHIQ53FT3 197 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 ZNF544Q6NX49 715 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 DHRS4L2Q6PKH6 230 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 C6orf89Q6UWU4 347 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 KTI12Q96EK9 354 aaPredicted RBP13.89□□□□□ -0.19
CRLF3-203ENST00000578692 RHNO1Q9BSD3 238 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 INTS9Q9NV88 658 aaKnown RBP13.89□□□□□ -0.19
CRLF3-203ENST00000578692 CORO2BQ9UQ03 480 aa13.89□□□□□ -0.19
CRLF3-203ENST00000578692 FN1P02751 2386 aaKnown RBP13.88□□□□□ -0.19
CRLF3-203ENST00000578692 A0A1B0GWA3 101 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 ZNF587BE7ETH6 402 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 UPK3AO75631 287 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 LGI1O95970 557 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 ZNF43P17038 809 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 SLC6A2P23975 617 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 HTR2AP28223 471 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 APOBEC3AP31941 199 aaPredicted RBP13.88□□□□□ -0.19
CRLF3-203ENST00000578692 CLDN17P56750 224 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 KRTAP1-1Q07627 177 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 SCARB2Q14108 478 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 SQLEQ14534 574 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 GLIPR1L2Q4G1C9 344 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 FAM69AQ5T7M9 428 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 C5orf46Q6UWT4 87 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 NET1Q7Z628 596 aaPredicted RBP13.88□□□□□ -0.19
CRLF3-203ENST00000578692 OR1K1Q8NGR3 316 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 DNAJA4Q8WW22 397 aaPredicted RBP13.88□□□□□ -0.19
CRLF3-203ENST00000578692 TAAR8Q969N4 342 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 OXGR1Q96P68 337 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 ZNF607Q96SK3 696 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 PRR14Q9BWN1 585 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 LINC00470Q9BZP3 86 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 RABEP2Q9H5N1 569 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 IKZF5Q9H5V7 419 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 TMEM38AQ9H6F2 299 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 OBP2BQ9NPH6 170 aa13.88□□□□□ -0.19
CRLF3-203ENST00000578692 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.88□□□□□ -0.19
CRLF3-203ENST00000578692 BMP4P12644 408 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 PAX7P23759 505 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 NUDT6P53370 316 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 TBRG1Q3YBR2 411 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 RUNDC3AQ59EK9 446 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 ALG10BQ5I7T1 473 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 ULK3Q6PHR2 472 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 DLEU7Q6UYE1 221 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 LINGO2Q7L985 606 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms