RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 SPATA3Q8NHX4 192 aa14.62□□□□□ -0.07
CCNF-203ENST00000564236 MGARPQ8TDB4 240 aa14.62□□□□□ -0.07
CCNF-203ENST00000564236 PTDSS2Q9BVG9 487 aa14.62□□□□□ -0.07
CCNF-203ENST00000564236 LINC00470Q9BZP3 86 aa14.62□□□□□ -0.07
CCNF-203ENST00000564236 RAD21L1Q9H4I0 556 aa14.62□□□□□ -0.07
CCNF-203ENST00000564236 TMBIM4Q9HC24 238 aa14.62□□□□□ -0.07
CCNF-203ENST00000564236 MOV10Q9HCE1 1003 aaKnown RBP14.62□□□□□ -0.07
CCNF-203ENST00000564236 CRNNQ9UBG3 495 aaPredicted RBP14.62□□□□□ -0.07
CCNF-203ENST00000564236 ATRQ13535 2644 aa14.62□□□□□ -0.07
CCNF-203ENST00000564236 ARPC4-TTLL3A0A0A6YYG9 625 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 TMEM247A6NEH6 219 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 TGDSO95455 350 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 BMP4P12644 408 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 HOXB1P14653 301 aaPredicted RBP14.61□□□□□ -0.07
CCNF-203ENST00000564236 ETS2P15036 469 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 SLC25A16P16260 332 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 PTNP21246 168 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 EGR4Q05215 589 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 BNIP2Q12982 314 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 RAB35Q15286 201 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 SWI5Q1ZZU3 235 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 MST1LQ2TV78 715 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 RPS26P11Q5JNZ5 115 aaPredicted RBP14.61□□□□□ -0.07
CCNF-203ENST00000564236 LRIF1Q5T3J3 769 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 C9orf135Q5VTT2 229 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 TMEM225Q6GV28 225 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 CXXC5Q7LFL8 322 aaKnown RBP14.61□□□□□ -0.07
CCNF-203ENST00000564236 LSRQ86X29 649 aaPredicted RBP14.61□□□□□ -0.07
CCNF-203ENST00000564236 EPHX4Q8IUS5 362 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 LSMEM1Q8N8F7 131 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 OR1K1Q8NGR3 316 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 BBS10Q8TAM1 723 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 C7orf26Q96N11 449 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 TNFRSF13CQ96RJ3 184 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 KATNB1Q9BVA0 655 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 RSPO3Q9BXY4 272 aaPredicted RBP14.61□□□□□ -0.07
CCNF-203ENST00000564236 TMEM45AQ9NWC5 275 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 RCE1Q9Y256 329 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 CR1P17927 2039 aa14.61□□□□□ -0.07
CCNF-203ENST00000564236 SONP18583 2426 aaKnown RBP14.61□□□□□ -0.07
CCNF-203ENST00000564236 LOC102725191A0A1B0GVB3 256 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 RPL36A-HNRNPH2H7BZ11 118 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 CLIC1O00299 241 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 ZNF432O94892 652 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 CSF3P09919 207 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 NUDT7P0C024 238 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 PRKAR1BP31321 381 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 SELENOPP49908 381 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 EFNA4P52798 201 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 VLDLRP98155 873 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 CHRNB3Q05901 458 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 TBRG1Q3YBR2 411 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 ZNF311Q5JNZ3 666 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 C6orf10Q5SRN2 563 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 BEND6Q5SZJ8 279 aaPredicted RBP14.6□□□□□ -0.07
CCNF-203ENST00000564236 KLHL24Q6TFL4 600 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 C5orf46Q6UWT4 87 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 GPAT4Q86UL3 456 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 PROX1Q92786 737 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 ZBTB9Q96C00 473 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 C1QTNF6Q9BXI9 259 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 CACYBPQ9HB71 228 aaKnown RBP14.6□□□□□ -0.07
CCNF-203ENST00000564236 SLC52A3Q9NQ40 469 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 TMEM160Q9NX00 188 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 ADPRHL2Q9NX46 363 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 USH1CQ9Y6N9 552 aa14.6□□□□□ -0.07
CCNF-203ENST00000564236 IGHV1-18A0A0C4DH31 117 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 A8MV72 311 aaPredicted RBP14.59□□□□□ -0.07
CCNF-203ENST00000564236 ZNF587BE7ETH6 402 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 ATP6V1G2-DDX39BF2Z307 99 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 PDE5AO76074 875 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 AHSA1O95433 338 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 IGLV1-44P01699 117 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 PNMTP11086 282 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 NCF2P19878 526 aaPredicted RBP14.59□□□□□ -0.07
CCNF-203ENST00000564236 SH3BGRP55822 239 aaPredicted RBP14.59□□□□□ -0.07
CCNF-203ENST00000564236 TMEM249Q2WGJ8 235 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 HIKESHIQ53FT3 197 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 C6orf52Q5T4I8 152 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 BLOC1S3Q6QNY0 202 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 LINGO2Q7L985 606 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 FUNDC1Q8IVP5 155 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 MSRB3Q8IXL7 192 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 ZNF525Q8N782 197 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 C10orf105Q8TEF2 133 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 BCL2L2Q92843 193 aaPredicted RBP14.59□□□□□ -0.07
CCNF-203ENST00000564236 SLC38A2Q96QD8 506 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 NELFAQ9H3P2 528 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 SLC25A37Q9NYZ2 338 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 B3GAT1Q9P2W7 334 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 ATP23Q9Y6H3 246 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 PMF1-BGLAPU3KQ54 211 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 ABCA1O95477 2261 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 COL6A5A8TX70 2615 aa14.59□□□□□ -0.07
CCNF-203ENST00000564236 TRBV5-3A0A0A0MS03 114 aa14.58□□□□□ -0.08
CCNF-203ENST00000564236 OR2T1O43869 369 aa14.58□□□□□ -0.08
CCNF-203ENST00000564236 F12P00748 615 aaPredicted RBP14.58□□□□□ -0.08
CCNF-203ENST00000564236 IGKV3-15P01624 115 aa14.58□□□□□ -0.08
CCNF-203ENST00000564236 ARAFP10398 606 aa14.58□□□□□ -0.08
CCNF-203ENST00000564236 ANKRD16Q6P6B7 361 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms