RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 GNB3P16520 340 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 IMPA1P29218 277 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 SHC1P29353 583 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 HIST2H3PS2Q5TEC6 136 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 TAS1R1Q7RTX1 841 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 LKAAEAR1Q8TD35 194 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
SYNM-203ENST00000560674 ZFAND5O76080 213 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 SSTP61278 116 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 NR0B2Q15466 257 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 SMAD2Q15796 467 aaKnown RBP11.76□□□□□ -0.53
SYNM-203ENST00000560674 Q499Y3 187 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 GAREM2Q75VX8 874 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 MAVSQ7Z434 540 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 PTRH1Q86Y79 214 aaKnown RBP11.76□□□□□ -0.53
SYNM-203ENST00000560674 ZNF595Q8IYB9 648 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 MMP21Q8N119 569 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 L3MBTL4Q8NA19 623 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 NUDT22Q9BRQ3 303 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 LIN7BQ9HAP6 207 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 RNF212BA8MTL3 300 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 SOCS6O14544 535 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 GABARAPO95166 117 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 OR5M10Q6IEU7 315 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 RDH10Q8IZV5 341 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 SLC39A13Q96H72 371 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 ZNF578Q96N58 590 aaPredicted RBP11.76□□□□□ -0.53
SYNM-203ENST00000560674 TMEM59Q9BXS4 323 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.76□□□□□ -0.53
SYNM-203ENST00000560674 TEX51A0A1B0GUA7 166 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.76□□□□□ -0.53
SYNM-203ENST00000560674 SLC16A6O15403 523 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 SUSD5O60279 629 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 KCNK2O95069 426 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 FOSL1P15407 271 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 APEX1P27695 318 aaKnown RBP11.76□□□□□ -0.53
SYNM-203ENST00000560674 IL2RGP31785 369 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 PPT1P50897 306 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 STK11Q15831 433 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 ZFP82Q8N141 532 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 CELF2-AS1Q8N7Q2 184 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 OR10K1Q8NGX5 313 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 RAB3CQ96E17 227 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 TNFRSF13CQ96RJ3 184 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 MAP3K3Q99759 626 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 QRSL1Q9H0R6 528 aaKnown RBP11.76□□□□□ -0.53
SYNM-203ENST00000560674 TIAM2Q8IVF5 1701 aa11.76□□□□□ -0.53
SYNM-203ENST00000560674 H0YGG7 62 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 ELAVL4P26378 380 aaKnown RBP11.75□□□□□ -0.53
SYNM-203ENST00000560674 HOXD9P28356 352 aaPredicted RBP11.75□□□□□ -0.53
SYNM-203ENST00000560674 HLA-FP30511 346 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 ERV3-1Q14264 604 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 HMGN3Q15651 99 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 MARCH8Q5T0T0 291 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 C1orf198Q9H425 327 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 A4GALTQ9NPC4 353 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 RGPD5Q99666 1765 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 RFXAPO00287 272 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 TCRBP04435 133 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 KITLGP21583 273 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 HTR1FP30939 366 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 Q6ZSR9 355 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 TOE1Q96GM8 510 aaKnown RBP11.75□□□□□ -0.53
SYNM-203ENST00000560674 OR5M11Q96RB7 305 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 CBX7O95931 251 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 FCGR2AP12318 317 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 ZP2Q05996 745 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 PDLIM3Q53GG5 364 aaPredicted RBP11.75□□□□□ -0.53
SYNM-203ENST00000560674 C17orf99Q6UX52 265 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 SLC35D2Q76EJ3 337 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 PGBD5Q8N414 524 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 OR2A12Q8NGT7 310 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 ST7LQ8TDW4 575 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 LMAN1LQ9HAT1 526 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 SIDT1Q9NXL6 827 aaKnown RBP11.75□□□□□ -0.53
SYNM-203ENST00000560674 CCDC88AQ3V6T2 1871 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 PLSCR5A0PG75 271 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 H7C1C5 153 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 LCN6P62502 163 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 SLCO4C1Q6ZQN7 724 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 ZNF808Q8N4W9 903 aaPredicted RBP11.75□□□□□ -0.53
SYNM-203ENST00000560674 ZNF454Q8N9F8 522 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 OR52I1Q8NGK6 324 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 OR13C9Q8NGT0 318 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 CLSTN3Q9BQT9 956 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 C11orf54Q9H0W9 315 aaPredicted RBP11.75□□□□□ -0.53
SYNM-203ENST00000560674 M6PRP20645 277 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 ITGB8P26012 769 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 ARG2P78540 354 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 C5orf46Q6UWT4 87 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 B3GLCTQ6Y288 498 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 CMIPQ8IY22 773 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 TMEM106AQ96A25 262 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 WDR76Q9H967 626 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 EMC7Q9NPA0 242 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 MED16Q9Y2X0 877 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 SNX11Q9Y5W9 270 aa11.75□□□□□ -0.53
SYNM-203ENST00000560674 USP54Q70EL1 1684 aa11.74□□□□□ -0.53
SYNM-203ENST00000560674 TACR3P29371 465 aa11.74□□□□□ -0.53
SYNM-203ENST00000560674 ACSM1Q08AH1 577 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms