RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 EXD3Q8N9H8 876 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 FADS6Q8N9I5 356 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 WDSUB1Q8N9V3 476 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 FAM156AQ8NDB6 213 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 OR2M7Q8NG81 312 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 OR5W2Q8NH69 310 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 B4GALNT2Q8NHY0 566 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 DUSP19Q8WTR2 217 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 GEMIN6Q8WXD5 167 aaKnown RBP5.19□□□□□ -1.58
SCAF11-213ENST00000550629 NR4A3Q92570 626 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 FAM162AQ96A26 154 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 CCDC124Q96CT7 223 aaKnown RBP5.19□□□□□ -1.58
SCAF11-213ENST00000550629 LRGUKQ96M69 825 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 TIMP4Q99727 224 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 POLR2J2Q9GZM3 115 aaKnown RBP5.19□□□□□ -1.58
SCAF11-213ENST00000550629 LAT2Q9GZY6 243 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 PCDHAC1Q9H158 963 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 POLR2J3Q9H1A7 115 aaKnown RBP5.19□□□□□ -1.58
SCAF11-213ENST00000550629 SLC25A18Q9H1K4 315 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 MAGIXQ9H6Y5 334 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 PTGES2Q9H7Z7 377 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 PROK2Q9HC23 129 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 DEPPQ9NTK1 212 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 FLRT3Q9NZU0 649 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 ICAM5Q9UMF0 924 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 USP22Q9UPT9 525 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 POMPQ9Y244 141 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 SLC9A8Q9Y2E8 581 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 C15orf41Q9Y2V0 281 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 KMT2BQ9UMN6 2715 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-213ENST00000550629 PIEZO2Q9H5I5 2752 aa5.19□□□□□ -1.58
SCAF11-213ENST00000550629 KALRNO60229 2985 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 TLN1Q9Y490 2541 aaKnown RBP5.18□□□□□ -1.58
SCAF11-213ENST00000550629 CACNA1GO43497 2377 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 A0A0G2JMM0 328 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 A0A1W2PPB8 328 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 A0A1W2PRS3 328 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ANKUB1A6NFN9 424 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 LINC00473A8K010 186 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 KIR3DP1A8MWS1 328 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 K7EM74 188 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 SCO2O43819 266 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 RASAL1O95294 804 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF682O95780 498 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 F10P00742 488 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 SERPINA1P01009 418 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 IFNW1P05000 195 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 HPNP05981 417 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 FESP07332 822 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 LINGO3P0C6S8 592 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 THRBP10828 461 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 UMPSP11172 480 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 NCK1P16333 377 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF17P17021 662 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ITGA2P17301 1181 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 PGCP20142 388 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 FKBP2P26885 142 aaKnown RBP5.18□□□□□ -1.58
SCAF11-213ENST00000550629 SRD5A2P31213 254 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 HTR3AP46098 478 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 P2RX1P51575 399 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF41P51814 821 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-213ENST00000550629 DSCR4P56555 118 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-213ENST00000550629 MS4A2Q01362 244 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF117Q03924 483 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 KLRB1Q12918 225 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 CBFBQ13951 182 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 NRF1Q16656 503 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 DUSP7Q16829 419 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 LRRC23Q53EV4 343 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-213ENST00000550629 IFI44LQ53G44 452 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 COLEC12Q5KU26 742 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 PRAMEF20Q5VT98 475 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 C1orf146Q5VVC0 180 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 OLIG3Q7RTU3 272 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 PIWIL3Q7Z3Z3 882 aaKnown RBP5.18□□□□□ -1.58
SCAF11-213ENST00000550629 GALNTL5Q7Z4T8 443 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 VRK2Q86Y07 508 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 CLIP4Q8N3C7 705 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF614Q8N883 585 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 LSMEM1Q8N8F7 131 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 SMYD1Q8NB12 490 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 CATSPER1Q8NEC5 780 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 OR2M3Q8NG83 312 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 GPR32P1Q8NGA4 272 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 OR4K17Q8NGC6 315 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 OR1J4Q8NGS1 313 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 TMEM234Q8WY98 164 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ST8SIA1Q92185 356 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 CNOT9Q92600 299 aaKnown RBP5.18□□□□□ -1.58
SCAF11-213ENST00000550629 C1GALT1C1Q96EU7 318 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 PYURFQ96I23 114 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ARHGDIGQ99819 225 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF559Q9BR84 538 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 UGT2B28Q9BY64 529 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 RTN4RQ9BZR6 473 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 TRIM2Q9C040 744 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 OR2B2Q9GZK3 357 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 UBQLN3Q9H347 655 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ACKR4Q9NPB9 350 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF71Q9NQZ8 489 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms