RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, human

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3B-205	ENST00000508386	RAD51C	O43502	376 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	DNPH1	O43598	174 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	CDC14B	O60729	498 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	IGHV2-5	P01817	119 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	C1QC	P02747	245 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	UBTFL6	P0CB48	400 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	NAT2	P11245	290 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	ZNF35	P13682	527 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	CBR1	P16152	277 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	SDC1	P18827	310 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	FST	P19883	344 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	IMPDH1	P20839	514 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	NR4A1	P22736	598 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	HMOX2	P30519	316 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	STX2	P32856	288 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	MAGEA8	P43361	318 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	PLTP	P55058	493 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	IL13RA1	P78552	427 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	ARF1	P84077	181 aa	Known RBP	4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	MVK	Q03426	396 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	SCGB2A2	Q13296	93 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	SNTB2	Q13425	540 aa	Known RBP	4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	NAB1	Q13506	487 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	CBFB	Q13951	182 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	ZNF141	Q15928	474 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	UAP1	Q16222	522 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	KRT80	Q6KB66	452 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	CDPF1	Q6NVV7	123 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	EMB	Q6PCB8	327 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	AAED1	Q7RTV5	226 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	SZRD1	Q7Z422	152 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	HMGN2P46	Q86SG4	172 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	MDP1	Q86V88	176 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	EPHX4	Q8IUS5	362 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	WDFY1	Q8IWB7	410 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	TMCO5A	Q8N6Q1	288 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	ZNF614	Q8N883	585 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	FAM71C	Q8NEG0	241 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	DEFB108B	Q8NET1	73 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	OR9K2	Q8NGE7	335 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	OR5D16	Q8NGK9	328 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	CLHC1	Q8NHS4	586 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	FAM76A	Q8TAV0	307 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	FBLIM1	Q8WUP2	373 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	TMIGD2	Q96BF3	282 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	ZNF764	Q96H86	408 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	FCRL1	Q96LA6	429 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	ANKRD27	Q96NW4	1050 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	TSSK3	Q96PN8	268 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	FANCD2OS	Q96PS1	177 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	TSPAN32	Q96QS1	320 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	RBM4B	Q9BQ04	359 aa	Known RBP	4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	SYT3	Q9BQG1	590 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	KRTAP17-1	Q9BYP8	105 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	MRPL46	Q9H2W6	279 aa	Known RBP	4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	REEP4	Q9H6H4	257 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	NTN4	Q9HB63	628 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	TMEM45A	Q9NWC5	275 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	PARPBP	Q9NWS1	579 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	B3GNT2	Q9NY97	397 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	TMEM181	Q9P2C4	612 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	LEF1	Q9UJU2	399 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	TRAPPC4	Q9Y296	219 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	SLC9A8	Q9Y2E8	581 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	HDGFL3	Q9Y3E1	203 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386	MMP24	Q9Y5R2	645 aa		4.87	□□□□□ -1.63
KDM3B-205	ENST00000508386		A0A0G2JMP0	313 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386		A0A0X1KG70	313 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	MDFIC2	A0A1B0GVS7	189 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	PRAMEF27	A3QJZ7	478 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	LIPT2	A6NK58	231 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	CLDN34	H7C241	214 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386		J3QLI3	93 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	SYNGR3	O43761	229 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	ZNF500	O60304	480 aa	Predicted RBP	4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	AKR7A3	O95154	331 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	HSPA4L	O95757	839 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	TSPAN15	O95858	294 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	IGLV1-40	P01703	118 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	GSN	P06396	782 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	ENO1	P06733	434 aa	Known RBP	4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	LAMP1	P11279	417 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	BCKDHA	P12694	445 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	RAB6A	P20340	208 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	ATP6V1C1	P21283	382 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	FPR2	P25090	351 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	RYK	P34925	604 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	APOBEC1	P41238	236 aa	Known RBP	4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	EVX1	P49640	407 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	PRKAA2	P54646	552 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	PKNOX1	P55347	436 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	LCN2	P80188	198 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	MRPS11	P82912	194 aa	Known RBP	4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	FUT5	Q11128	374 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	LCP2	Q13094	533 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	BAMBI	Q13145	260 aa		4.86	□□□□□ -1.63
KDM3B-205	ENST00000508386	DAG1	Q14118	895 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms