RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 UBTFL1P0CB47 393 aaPredicted RBP0.82□□□□□ -2.28
CCDC93-209ENST00000488908 NPIPA8P0DM63 369 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 PGAM1P18669 254 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 TNNI3P19429 210 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 OMGP23515 440 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 TNFRSF17Q02223 184 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 STK11Q15831 433 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 MICBQ29980 383 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 SPIN3Q5JUX0 258 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 LDLRAP1Q5SW96 308 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 RAET1LQ5VY80 246 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 Q6ZN92 141 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 Q6ZR03 302 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 Q6ZS52 159 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 DPY19L4Q7Z388 723 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 ZDHHC21Q8IVQ6 265 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 PGAM4Q8N0Y7 254 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 ATP6V0D2Q8N8Y2 350 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 ZNF461Q8TAF7 563 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 ZFP90Q8TF47 636 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 RGP1Q92546 391 aaPredicted RBP0.82□□□□□ -2.28
CCDC93-209ENST00000488908 TM4SF19Q96DZ7 209 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 C12orf66Q96MD2 445 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 RNF157Q96PX1 679 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 ALG12Q9BV10 488 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 NXF5Q9H1B4 397 aaKnown RBP0.82□□□□□ -2.28
CCDC93-209ENST00000488908 SRMSQ9H3Y6 488 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 RHOJQ9H4E5 214 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 WDR76Q9H967 626 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 NGBQ9NPG2 151 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 NPIPA1Q9UND3 350 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 B9D1Q9UPM9 204 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 NUDCQ9Y266 331 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 IGSF9BQ9UPX0 1349 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 TET2Q6N021 2002 aaPredicted RBP0.81□□□□□ -2.28
CCDC93-209ENST00000488908 TUBGCP6Q96RT7 1819 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 IGLV3-12A0A075B6K2 115 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 IGKV1D-8A0A087WSZ0 117 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 IGHV3-66A0A0C4DH42 116 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 A0A1B0GUS0 222 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 PRSS37A4D1T9 235 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 CCDC182A6NF36 153 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 G3V4G9 280 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 H3BNH8 94 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 RPL36A-HNRNPH2H7BZ11 118 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 XKRYO14609 159 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 CTAGE5O15320 804 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 RS1O15537 224 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 CA1P00915 261 aaPredicted RBP0.81□□□□□ -2.28
CCDC93-209ENST00000488908 IGLV2-23P01705 113 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 ETS1P14921 441 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 TCN2P20062 427 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 COX5AP20674 150 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 COL8A2P25067 703 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 TDO2P48775 406 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 EWSR1Q01844 656 aaKnown RBP eCLIP0.81□□□□□ -2.28
CCDC93-209ENST00000488908 SPIBQ01892 262 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 IGFBP7Q16270 282 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 MARCH8Q5T0T0 291 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 GPRC6AQ5T6X5 926 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 NCR3LG1Q68D85 454 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 RAET1GQ6H3X3 334 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 GALNT17Q6IS24 598 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 LYPD2Q6UXB3 125 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 HSDL2Q6YN16 418 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 RBM43Q6ZSC3 357 aaKnown RBP0.81□□□□□ -2.28
CCDC93-209ENST00000488908 SLC26A11Q86WA9 606 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 ELMOD2Q8IZ81 293 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 CLDN19Q8N6F1 224 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 OR52B4Q8NGK2 314 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 OR5L2Q8NGL0 311 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 OR2G3Q8NGZ4 309 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 ACTRT1Q8TDG2 376 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 SAMD8Q96LT4 415 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 COL21A1Q96P44 957 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 OR2A5Q96R48 311 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 TESK2Q96S53 571 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 NIPSNAP3BQ9BS92 247 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 SPXQ9BT56 116 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 RIOK2Q9BVS4 552 aaKnown RBP0.81□□□□□ -2.28
CCDC93-209ENST00000488908 DNTTIP1Q9H147 329 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 LINC00597Q9H2U6 94 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 RPP21Q9H633 154 aaKnown RBP0.81□□□□□ -2.28
CCDC93-209ENST00000488908 NOX3Q9HBY0 568 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 CTPS2Q9NRF8 586 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 QPCTLQ9NXS2 382 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 KCNIP1Q9NZI2 227 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 CLCF1Q9UBD9 225 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 SPASTQ9UBP0 616 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 FETUBQ9UGM5 382 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 NOL7Q9UMY1 257 aaKnown RBP0.81□□□□□ -2.28
CCDC93-209ENST00000488908 RASD1Q9Y272 281 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 RPL36Q9Y3U8 105 aaKnown RBP0.81□□□□□ -2.28
CCDC93-209ENST00000488908 TMEM14AQ9Y6G1 99 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 FANCIQ9NVI1 1328 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 NCAPD2Q15021 1401 aa0.81□□□□□ -2.28
CCDC93-209ENST00000488908 IGHV5-51A0A0C4DH38 117 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 A0A0U1RQV5 110 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 RNF103-CHMP3A0A140T963 221 aa0.8□□□□□ -2.28
CCDC93-209ENST00000488908 PLAC8L1A1L4L8 177 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms