RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 XAGE5Q8WWM1 108 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 RDH5Q92781 318 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 FAHD2AQ96GK7 314 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 ZNF747Q9BV97 191 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 LINC00470Q9BZP3 86 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 NELFAQ9H3P2 528 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 NOX3Q9HBY0 568 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 PCDHGB1Q9Y5G3 927 aa13.88□□□□□ -0.19
DDX56-210ENST00000479440 MGAM2Q2M2H8 2515 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 A0A1W2PPM1 405 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 CLDN24A6NM45 220 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 TMEM233B4DJY2 109 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 RNASET2O00584 256 aaKnown RBP13.87□□□□□ -0.19
DDX56-210ENST00000479440 BCL10O95999 233 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 CELA3BP08861 270 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 ANPEPP15144 967 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 CRHR1P34998 444 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 DEFA6Q01524 100 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 ROR2Q01974 943 aaKnown RBP13.87□□□□□ -0.19
DDX56-210ENST00000479440 FUT5Q11128 374 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 GNA13Q14344 377 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 GPAT3Q53EU6 434 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 ELFN2Q5R3F8 820 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 IL23RQ5VWK5 629 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 KRT80Q6KB66 452 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 TNFAIP8L2Q6P589 184 aaPredicted RBP13.87□□□□□ -0.19
DDX56-210ENST00000479440 LINGO2Q7L985 606 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 MYPOPQ86VE0 399 aaPredicted RBP13.87□□□□□ -0.19
DDX56-210ENST00000479440 C10orf107Q8IVU9 208 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 RIMKLAQ8IXN7 391 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 CLECL1Q8IZS7 167 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 CLEC4FQ8N1N0 589 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 MRPL24Q96A35 216 aaKnown RBP13.87□□□□□ -0.19
DDX56-210ENST00000479440 GATA5Q9BWX5 397 aaPredicted RBP13.87□□□□□ -0.19
DDX56-210ENST00000479440 RACGAP1Q9H0H5 632 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 MS4A5Q9H3V2 200 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 GRPEL1Q9HAV7 217 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 CRLF2Q9HC73 371 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 SLC52A3Q9NQ40 469 aa13.87□□□□□ -0.19
DDX56-210ENST00000479440 LOC105371242A0A075B767 164 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 A0A0G2JK05 382 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 COPEO14579 308 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 UPK3AO75631 287 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 FGF4P08620 206 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 CXCR1P25024 350 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 FOXL1Q12952 345 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 PCLAFQ15004 111 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 PGS1Q32NB8 556 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 ZNF311Q5JNZ3 666 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 PRAMEF8Q5VWM4 474 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 PRAMEF7Q5VXH5 474 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 CREB3L2Q70SY1 520 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 C1QL2Q7Z5L3 287 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 HMGN2P46Q86SG4 172 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 BPIFB2Q8N4F0 458 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 ANKK1Q8NFD2 765 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 CNOT9Q92600 299 aaKnown RBP13.86□□□□□ -0.19
DDX56-210ENST00000479440 ZNF416Q9BWM5 594 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 ADPRHL2Q9NX46 363 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 TREM2Q9NZC2 230 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 REV1Q9UBZ9 1251 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 RASD1Q9Y272 281 aa13.86□□□□□ -0.19
DDX56-210ENST00000479440 A0A0G2JMP0 313 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 A0A0X1KG70 313 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 CFAP73A6NFT4 308 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 RPL36A-HNRNPH2H7BZ11 118 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 FRS3O43559 492 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 TRIM13O60858 407 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 CHRNGP07510 517 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 UQCRC2P22695 453 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 CAPZA2P47755 286 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 TMEM33P57088 247 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 MRPS11P82912 194 aaKnown RBP13.85□□□□□ -0.19
DDX56-210ENST00000479440 MYBPC1Q00872 1141 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 MAD2L1Q13257 205 aaPredicted RBP13.85□□□□□ -0.19
DDX56-210ENST00000479440 GSTA3Q16772 222 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 WHAMMP3Q1A5X7 153 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 UGT3A2Q3SY77 523 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 C6orf136Q5SQH8 315 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 CCDC36Q8IYA8 594 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 LRRC17Q8N6Y2 441 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 OR4M2Q8NGB6 313 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 AGR3Q8TD06 166 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 RAB8BQ92930 207 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 SLC6A7Q99884 636 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 MRPL37Q9BZE1 423 aaKnown RBP13.85□□□□□ -0.19
DDX56-210ENST00000479440 G6PC2Q9NQR9 355 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 ZNF275Q9NSD4 429 aaPredicted RBP13.85□□□□□ -0.19
DDX56-210ENST00000479440 RCE1Q9Y256 329 aa13.85□□□□□ -0.19
DDX56-210ENST00000479440 PPIHO43447 177 aaKnown RBP13.84□□□□□ -0.19
DDX56-210ENST00000479440 NPHS1O60500 1241 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 SLC43A1O75387 559 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 HPXP02790 462 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 GSNP06396 782 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 CHRM4P08173 479 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 P2RY4P51582 365 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 RPS23P62266 143 aaKnown RBP13.84□□□□□ -0.19
DDX56-210ENST00000479440 UBA52P62987 128 aaKnown RBP13.84□□□□□ -0.19
DDX56-210ENST00000479440 ARF1P84077 181 aaKnown RBP13.84□□□□□ -0.19
DDX56-210ENST00000479440 EPS8Q12929 822 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms