RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 SERPINA9Q86WD7 417 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 MMAAQ8IVH4 418 aaKnown RBP0.91□□□□□ -2.26
LRCH3-209ENST00000452660 ZNF695Q8IW36 515 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 KLHL7Q8IXQ5 586 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 LSMEM1Q8N8F7 131 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 ATAD1Q8NBU5 361 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 OR6X1Q8NH79 312 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 UBALD1Q8TB05 177 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 ZCCHC13Q8WW36 166 aaKnown RBP0.91□□□□□ -2.26
LRCH3-209ENST00000452660 IL1F10Q8WWZ1 152 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 ATP6V0A1Q93050 837 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 TCEAL4Q96EI5 215 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 RNF185Q96GF1 192 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 GBP5Q96PP8 586 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 NRIP2Q9BQI9 281 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 LZTS2Q9BRK4 669 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 PELOQ9BRX2 385 aaKnown RBP0.91□□□□□ -2.26
LRCH3-209ENST00000452660 NT5C3AQ9H0P0 336 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 ASCL3Q9NQ33 180 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 NANSQ9NR45 359 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 ENTPD4Q9Y227 616 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 IFT52Q9Y366 437 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 DYNC1H1Q14204 4646 aaKnown RBP0.91□□□□□ -2.26
LRCH3-209ENST00000452660 ZANQ9Y493 2812 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 TENM3Q9P273 2699 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 NRCAMQ92823 1304 aa0.9□□□□□ -2.26
LRCH3-209ENST00000452660 HMCN2Q8NDA2 5059 aa0.9□□□□□ -2.26
LRCH3-209ENST00000452660 STARD9Q9P2P6 4700 aa0.9□□□□□ -2.26
LRCH3-209ENST00000452660 MDC1Q14676 2089 aaKnown RBP0.9□□□□□ -2.26
LRCH3-209ENST00000452660 DNAH10Q8IVF4 4471 aa0.9□□□□□ -2.26
LRCH3-209ENST00000452660 TENM2Q9NT68 2774 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 ESYT2A0FGR8 921 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 RBMY1BA6NDE4 496 aaKnown RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 RBMY1EA6NEQ0 496 aaKnown RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 TUBAL3A6NHL2 446 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 GJE1A6NN92 205 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 C19orf84I3L1E1 186 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 HAS3O00219 553 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 ECI2O75521 394 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 SCRG1O75711 98 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 AKAP3O75969 853 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 HIST1H2AGP0C0S8 130 aaPredicted RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 RBMY1DP0C7P1 496 aaKnown RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 SMIM10L2AP0DMW4 78 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 SMIM10L2BP0DMW5 78 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 ADORA1P30542 326 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 HOXA6P31267 233 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 HPDP32754 393 aaPredicted RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 CCR2P41597 374 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 QARSP47897 775 aaKnown RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 RPL29P47914 159 aaKnown RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 EMDP50402 254 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 RPS6P62753 249 aaKnown RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 ROR1Q01973 937 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 ZNF33AQ06730 810 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 NPRL3Q12980 569 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 RAB35Q15286 201 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 CEBPEQ15744 281 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 CCDC57Q2TAC2 916 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 TEX44Q53QW1 395 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 CAVIN4Q5BKX8 364 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 FAM78AQ5JUQ0 283 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 CLLU1OSQ5K130 101 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 MYO7BQ6PIF6 2116 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 C16orf54Q6UWD8 224 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 PET117Q6UWS5 81 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 LPCAT2Q7L5N7 544 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 TMEM252Q8N6L7 170 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 WFDC11Q8NEX6 87 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 TSTD1Q8NFU3 115 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 DNAJB3Q8WWF6 145 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 STARD8Q92502 1023 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 HIST1H2ACQ93077 130 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 PSMG2Q969U7 264 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 RAB39BQ96DA2 213 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 MRPL53Q96EL3 112 aaKnown RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 C19orf60Q96EN9 201 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 DYNLL2Q96FJ2 89 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 PANX3Q96QZ0 392 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 CCNL2Q96S94 520 aaPredicted RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 FEM1AQ9BSK4 669 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 APOOQ9BUR5 198 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 GPR61Q9BZJ8 451 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 EDEM3Q9BZQ6 932 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 TMEM206Q9H813 350 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 DNAJC17Q9NVM6 304 aaKnown RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 AATFQ9NY61 560 aaKnown RBP eCLIP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 GALPQ9UBC7 116 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 GINS2Q9Y248 185 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 TP53TG5Q9Y2B4 290 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 Q9Y3F1 56 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 RFNGQ9Y644 331 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 COL27A1Q8IZC6 1860 aaPredicted RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 MYO18AQ92614 2054 aaKnown RBP0.9□□□□□ -2.27
LRCH3-209ENST00000452660 POLEQ07864 2286 aa0.9□□□□□ -2.27
LRCH3-209ENST00000452660 PLXND1Q9Y4D7 1925 aa0.89□□□□□ -2.27
LRCH3-209ENST00000452660 MYH4Q9Y623 1939 aa0.89□□□□□ -2.27
LRCH3-209ENST00000452660 NUMA1Q14980 2115 aa0.89□□□□□ -2.27
LRCH3-209ENST00000452660 MYCBP2O75592 4640 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms