RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 CYGBQ8WWM9 190 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 CDS1Q92903 461 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 RIT1Q92963 219 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 TAMM41Q96BW9 452 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 KTI12Q96EK9 354 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 RBM18Q96H35 190 aaKnown RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC41A2Q96JW4 573 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ADGRG7Q96K78 797 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ART5Q96L15 291 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF681Q96N22 645 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF285Q96NJ3 590 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR1F2PQ96R84 312 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR6C1Q96RD1 312 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 RBM4BQ9BQ04 359 aaKnown RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 DOHHQ9BU89 302 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 EDEM2Q9BV94 578 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 RBM4Q9BWF3 364 aaKnown RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 OSBPL11Q9BXB4 747 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 TRIM4Q9C037 500 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ANKRA2Q9H9E1 313 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 IL1RAPQ9NPH3 570 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 G6PC2Q9NQR9 355 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 FGF21Q9NSA1 209 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 KLHL28Q9NXS3 571 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 SMPD3Q9NY59 655 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 MAT2BQ9NZL9 334 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 DHCR7Q9UBM7 475 aaKnown RBP3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ABCG2Q9UNQ0 655 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 ERVK-19Q9WJR5 959 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 LIPT1Q9Y234 373 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC9A8Q9Y2E8 581 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 PADI2Q9Y2J8 665 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 PAM16Q9Y3D7 125 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 WDR45Q9Y484 360 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 MMACHCQ9Y4U1 282 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 PCDHGB3Q9Y5G1 929 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 U3KQV3 271 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 PI4KAP42356 2102 aa3.46□□□□□ -1.86
HMGB3P20-201ENST00000417997 TECTAO75443 2155 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 A0A0G2JPF8 293 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 IGHV5-10-1A0A0J9YXX1 117 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 MAGEA13PA6NCF6 341 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 EFCAB7A8K855 629 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 CYSRT1A8MQ03 144 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 C17orf105B2RV13 164 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 HNRNPCL2B2RXH8 293 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 HNRNPCL3B7ZW38 293 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 FAM157AC9JC47 383 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 D6RAR5 112 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 H0YJX3 145 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 TNFRSF11BO00300 401 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 UPK1AO00322 258 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PLOD2O00469 737 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 AP3D1O14617 1153 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 CASC3O15234 703 aaKnown RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 CTNSO60931 367 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 DNAJB6O75190 326 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 SCRG1O75711 98 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 UGT2B17O75795 530 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 DIRAS1O95057 198 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 GADD45GO95257 159 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 H6PDO95479 791 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 CH25HO95992 272 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 SEMG1P04279 462 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 CHRM4P08173 479 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 SNRNP70P08621 437 aaKnown RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 TFPTP0C1Z6 253 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 CT62P0C5K7 136 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC35E2P0CK97 266 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 HNRNPCL4P0DMR1 293 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ACP2P11117 423 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ETS2P15036 469 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 FOLR1P15328 257 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 MAOAP21397 527 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 IGFBP5P24593 272 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 CAPGP40121 348 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 MAGEA2P43356 314 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 YAP1P46937 504 aaKnown RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR1E2P47887 323 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 ALDH3A2P51648 485 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PDX1P52945 283 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 IST1P53990 364 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 HSD17B7P56937 341 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 RGS8P57771 180 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 TAS2R41P59536 307 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 KCNJ10P78508 379 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 VLDLRP98155 873 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 POU3F1Q03052 451 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 FUT5Q11128 374 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 MYBPHQ13203 477 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 BIKQ13323 160 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 TRA2AQ13595 282 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 GANABQ14697 944 aaKnown RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 EXOSC7Q15024 291 aaKnown RBP3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PDK3Q15120 406 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 DUSP5Q16690 384 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 PRICKLE4Q2TBC4 344 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 RFX4Q33E94 735 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 LIN52Q52LA3 116 aa3.45□□□□□ -1.86
HMGB3P20-201ENST00000417997 EIPR1Q53HC9 387 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms