RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MGAT4BQ9UQ53 548 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 KLF2Q9Y5W3 355 aaPredicted RBP4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 CELSR2Q9HCU4 2923 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 CREBBPQ92793 2442 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 A0A0A6YYD4 124 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 IGHV5-10-1A0A0J9YXX1 117 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 FAM230AA0A1W2PPH8 454 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 DUX1O43812 170 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 STK17BO94768 372 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 HEXBP07686 556 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 CCDC159P0C7I6 412 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 NCF1P14598 390 aaPredicted RBP4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 CD1CP29017 333 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 UGT1A3P35503 534 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 ATP4BP51164 291 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 PDZK1IP1Q13113 114 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 CYTH1Q15438 398 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 SIX1Q15475 284 aaPredicted RBP4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 ACSF3Q4G176 576 aaPredicted RBP4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 TMEM52BQ4KMG9 183 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 BRMS1LQ5PSV4 323 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 ARSKQ6UWY0 536 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 TIPARPQ7Z3E1 657 aaKnown RBP4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 SLC47A2Q86VL8 602 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 RNF130Q86XS8 419 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 CCDC71Q8IV32 467 aaPredicted RBP4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 OR2AP1Q8NGE2 309 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 MIPOL1Q8TD10 442 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 PATE1Q8WXA2 126 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 SHC3Q92529 594 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 NR4A3Q92570 626 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 MCHR2Q969V1 340 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 RAB7BQ96AH8 199 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 PPP1R16AQ96I34 528 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 GSDMAQ96QA5 445 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 APOOQ9BUR5 198 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 KRTAP17-1Q9BYP8 105 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 OCR1Q9BZK8 76 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 SP140LQ9H930 580 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 MRPL40Q9NQ50 206 aaKnown RBP4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 DYRK4Q9NR20 520 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 TAS2R16Q9NYV7 291 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 TMEM9Q9P0T7 183 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZNF346Q9UL40 294 aaKnown RBP4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 FBXO7Q9Y3I1 522 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 AP1M2Q9Y6Q5 423 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 U3KQV3 271 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 MYLKQ15746 1914 aa4.54□□□□□ -1.68
RNU4-39P-201ENST00000362455 OTOGQ6ZRI0 2925 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 TSPAN11A1L157 253 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 A8MXK9 166 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 EPM2AB3EWF7 344 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 TMX2-CTNND1H3BSU7 103 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 H7C423 109 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 MED7O43513 233 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 LANCL1O43813 399 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 TM7SF2O76062 418 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 SORBS2O94875 1100 aaKnown RBP4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 POP4O95707 220 aaKnown RBP4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 AK1P00568 194 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 FGF1P05230 155 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 GSTA1P08263 222 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 RRASP10301 218 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 SFTPCP11686 197 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 F8A1P23610 371 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 MT3P25713 68 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 PTPN6P29350 595 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 CDH5P33151 784 aaPredicted RBP4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 CAPGP40121 348 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 RGRP47804 291 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 UQCRFS1P47985 274 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 SULT1E1P49888 294 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 RAG2P55895 527 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 STX17P56962 302 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 HSF2Q03933 536 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 KLHL30Q0D2K2 578 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 RFTN1Q14699 578 aaPredicted RBP4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 ELOCQ15369 112 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 SLC25A52Q3SY17 297 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 CCDC14Q49A88 953 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 C14orf28Q4W4Y0 310 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 AGAP7PQ5VUJ5 663 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 SPECC1LQ69YQ0 1117 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 LUZP1Q86V48 1076 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 RANBP3LQ86VV4 465 aaPredicted RBP4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 MISPQ8IVT2 679 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 SAMD12Q8N8I0 201 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 NPRL2Q8WTW4 380 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 DHTKD1Q96HY7 919 aaPredicted RBP4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 TSGA13Q96PP4 275 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 TSG101Q99816 390 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 TRIM62Q9BVG3 475 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZYG11BQ9C0D3 744 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 ADNPQ9H2P0 1102 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 ALG9Q9H6U8 611 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 ATXN10Q9UBB4 475 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 P2RX2Q9UBL9 471 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 SH3BGRL2Q9UJC5 107 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 RARRES3Q9UL19 164 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms