RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 TMEM225Q6GV28 225 aa13.09□□□□□ -0.31
GDPD3-201ENST00000360688 CREB3L2Q70SY1 520 aa13.09□□□□□ -0.31
GDPD3-201ENST00000360688 LINGO2Q7L985 606 aa13.09□□□□□ -0.31
GDPD3-201ENST00000360688 SPATA19Q7Z5L4 167 aa13.09□□□□□ -0.31
GDPD3-201ENST00000360688 ZNF440Q8IYI8 595 aa13.09□□□□□ -0.31
GDPD3-201ENST00000360688 LRRC34Q8IZ02 419 aa13.09□□□□□ -0.31
GDPD3-201ENST00000360688 TRIML2Q8N7C3 387 aa13.09□□□□□ -0.31
GDPD3-201ENST00000360688 BCL2L2Q92843 193 aaPredicted RBP13.09□□□□□ -0.31
GDPD3-201ENST00000360688 PANX1Q96RD7 426 aa13.09□□□□□ -0.31
GDPD3-201ENST00000360688 KCNS3Q9BQ31 491 aa13.09□□□□□ -0.31
GDPD3-201ENST00000360688 KATNB1Q9BVA0 655 aa13.09□□□□□ -0.31
GDPD3-201ENST00000360688 NUF2Q9BZD4 464 aa13.09□□□□□ -0.31
GDPD3-201ENST00000360688 CDHR4A6H8M9 788 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 B9A039 149 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 ZNF587BE7ETH6 402 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 NR5A2O00482 541 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 PDE5AO76074 875 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 TGFAP01135 160 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 GSNP06396 782 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 C8BP07358 591 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 ALDOCP09972 364 aaKnown RBP13.08□□□□□ -0.32
GDPD3-201ENST00000360688 OR4A8P0C604 315 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 NR2F1P10589 423 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 ZNF23P17027 643 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 IL12AP29459 219 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 ACAA2P42765 397 aaKnown RBP13.08□□□□□ -0.32
GDPD3-201ENST00000360688 ANXA11P50995 505 aaKnown RBP13.08□□□□□ -0.32
GDPD3-201ENST00000360688 NME5P56597 212 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 UFM1P61960 85 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 MAPK11Q15759 364 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 OGFOD2Q6N063 350 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 ANKRD16Q6P6B7 361 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 ZNF621Q6ZSS3 439 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 PNPT1Q8TCS8 783 aaKnown RBP13.08□□□□□ -0.32
GDPD3-201ENST00000360688 ALKBH3Q96Q83 286 aaPredicted RBP13.08□□□□□ -0.32
GDPD3-201ENST00000360688 SOX7Q9BT81 388 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 TAPBPLQ9BX59 468 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 BPESC1Q9GZL8 116 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 PLK3Q9H4B4 646 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 MEAF6Q9HAF1 191 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 ADPRHL2Q9NX46 363 aa13.08□□□□□ -0.32
GDPD3-201ENST00000360688 CRNNQ9UBG3 495 aaPredicted RBP13.08□□□□□ -0.32
GDPD3-201ENST00000360688 ARPC4-TTLL3A0A0A6YYG9 625 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 A8MVM7 634 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 HMGB1P1B2RPK0 211 aaPredicted RBP13.07□□□□□ -0.32
GDPD3-201ENST00000360688 FRS3O43559 492 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 VAMP5O95183 116 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 CECR9P0C854 216 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 HNF1AP20823 631 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 PAX7P23759 505 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 CALCRP30988 508 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 PPOXP50336 477 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 UBE2NP61088 152 aaKnown RBP13.07□□□□□ -0.32
GDPD3-201ENST00000360688 TUBA1BP68363 451 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 TUBA4AP68366 448 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 NAAAQ02083 359 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 EFNB3Q15768 340 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 C3orf36Q3SXR2 165 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 IQCCQ4KMZ1 466 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 WBP2NLQ6ICG8 309 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 VHLLQ6RSH7 139 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 ZNF836Q6ZNA1 936 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 TUBA1AQ71U36 451 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 VRK2Q86Y07 508 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 EPHX4Q8IUS5 362 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 PEX5LQ8IYB4 626 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 CADM2Q8N3J6 435 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 MAGEE2Q8TD90 523 aaPredicted RBP13.07□□□□□ -0.32
GDPD3-201ENST00000360688 ZNF317Q96PQ6 595 aaPredicted RBP13.07□□□□□ -0.32
GDPD3-201ENST00000360688 OR52E6Q96RD3 313 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 NELFAQ9H3P2 528 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 SEC61A2Q9H9S3 476 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 PNPOQ9NVS9 261 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 AIG1Q9NVV5 245 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 THAP1Q9NVV9 213 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 PRDM4Q9UKN5 801 aa13.07□□□□□ -0.32
GDPD3-201ENST00000360688 A0A096LPE4 126 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 A0A1W2PPZ6 126 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 OR6C65A6NJZ3 312 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 NPIPB7O75200 414 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 SNNO75324 88 aaPredicted RBP13.06□□□□□ -0.32
GDPD3-201ENST00000360688 UPK3AO75631 287 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 IGLV1-44P01699 117 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 PGRP06401 933 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 PRG2P13727 222 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 IDH3GP51553 393 aaPredicted RBP13.06□□□□□ -0.32
GDPD3-201ENST00000360688 MVDP53602 400 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 SQLEQ14534 574 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 CR1LQ2VPA4 569 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 LIN52Q52LA3 116 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 TTMPQ5BVD1 217 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 C1orf140Q5VVS0 124 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 NIPAL3Q6P499 406 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 ZNF540Q8NDQ6 660 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 OR52P1PQ8NH57 321 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 LINC00470Q9BZP3 86 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 RASD1Q9Y272 281 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 DSPPQ9NZW4 1301 aa13.06□□□□□ -0.32
GDPD3-201ENST00000360688 LRP5LA4QPB2 252 aa13.05□□□□□ -0.32
GDPD3-201ENST00000360688 HAX1O00165 279 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms