RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 PPIGQ13427 754 aaKnown RBP eCLIP6.13□□□□□ -1.43
ZNF540-201ENST00000316433 PTGES3Q15185 160 aaKnown RBP6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ODF4Q2M2E3 257 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 IFI44LQ53G44 452 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF626Q68DY1 528 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 TBC1D3GQ6DHY5 549 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 OR10K2Q6IF99 312 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 NOXRED1Q6NXP6 359 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 SLC36A4Q6YBV0 504 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 OR2L3Q8NG85 312 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 OR1J4Q8NGS1 313 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 NEIL3Q8TAT5 605 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 OIT3Q8WWZ8 545 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ASB13Q8WXK3 278 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 OTUB2Q96DC9 234 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF514Q96K75 400 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-201ENST00000316433 NIPSNAP1Q9BPW8 284 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 NRSN2Q9GZP1 204 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 GPN1Q9HCN4 374 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-201ENST00000316433 RLIMQ9NVW2 624 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 CALML5Q9NZT1 146 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 OR14J1Q9UGF5 321 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 CD84Q9UIB8 345 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 PADI3Q9ULW8 664 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 HS3ST2Q9Y278 367 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 FNDC3AQ9Y2H6 1198 aaKnown RBP6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ENPP4Q9Y6X5 453 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 A0A0D9SG52 128 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 KANTRA0A1W2PQU2 76 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 SHISA3A0PJX4 238 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 A6NNC1 897 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 TMEM238C9JI98 176 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 F5H5P2 479 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 RPL36A-HNRNPH2H7BZ11 118 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 K7ERQ8 282 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 CLIC1O00299 241 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 TNFRSF11BO00300 401 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 FAAHO00519 579 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ARPC1BO15143 372 aaKnown RBP6.13□□□□□ -1.43
ZNF540-201ENST00000316433 PIAS2O75928 621 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 PCDH8O95206 1070 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 PSMB1P20618 241 aaKnown RBP6.13□□□□□ -1.43
ZNF540-201ENST00000316433 CFPP27918 469 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 RAE1P78406 368 aaKnown RBP6.13□□□□□ -1.43
ZNF540-201ENST00000316433 LSM11P83369 360 aaKnown RBP eCLIP6.13□□□□□ -1.43
ZNF540-201ENST00000316433 CNTN1Q12860 1018 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 RGNQ15493 299 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ACTBL2Q562R1 376 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ENTPD8Q5MY95 495 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 IDNKQ5T6J7 187 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 NUP54Q7Z3B4 507 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 HSD17B11Q8NBQ5 300 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 TNFRSF14Q92956 283 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 FBXO32Q969P5 355 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ISOC2Q96AB3 205 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF75AQ96N20 296 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 PTCHD1Q96NR3 888 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 CLUHP3Q96NS8 147 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 SGPP1Q9BX95 441 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 NOX3Q9HBY0 568 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 BCL2L10Q9HD36 194 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 MEPEQ9NQ76 525 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-201ENST00000316433 TMEM184CQ9NVA4 438 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ASB6Q9NWX5 421 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 TAS2R10Q9NYW0 307 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 DOK5Q9P104 306 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 CBLCQ9ULV8 474 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 TBC1D3DA0A087WVF3 549 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 TBC1D3IA0A087WXS9 549 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 TBC1D3EA0A087X179 549 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF840PA6NDX5 716 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 MANSC4A6NHS7 340 aaPredicted RBP6.12□□□□□ -1.43
ZNF540-201ENST00000316433 SNRPGP15A8MWD9 76 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 TBC1D3LB9A6J9 549 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 RFXANKO14593 260 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 FGF16O43320 207 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 SUV39H1O43463 412 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 PRAMEF12O95522 483 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 PDYNP01213 254 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 DGCR2P98153 550 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 SP3Q02447 781 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 OC90Q02509 493 aaPredicted RBP6.12□□□□□ -1.43
ZNF540-201ENST00000316433 KLF9Q13886 244 aaPredicted RBP6.12□□□□□ -1.43
ZNF540-201ENST00000316433 KHDC3LQ587J8 217 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 HIST2H3PS2Q5TEC6 136 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 NKAIN2Q5VXU1 208 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 SFRP4Q6FHJ7 346 aaPredicted RBP6.12□□□□□ -1.43
ZNF540-201ENST00000316433 TBC1D3CQ6IPX1 549 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 FAM199XQ6PEV8 388 aaPredicted RBP6.12□□□□□ -1.43
ZNF540-201ENST00000316433 ULK3Q6PHR2 472 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 FIGNL1Q6PIW4 674 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 TMEM64Q6YI46 380 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 TPRG1Q6ZUI0 275 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 DCXRQ7Z4W1 244 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 SERPINA9Q86WD7 417 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 NRROSQ86YC3 692 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 MARCH9Q86YJ5 346 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 TBC1D3Q8IZP1 549 aaPredicted RBP6.12□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF664Q8N3J9 261 aa6.12□□□□□ -1.43
ZNF540-201ENST00000316433 SAMD12Q8N8I0 201 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms