RNA–Protein interactions for RNA: ENST00000302763.11

CTNNA1-201, Transcript of catenin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-201ENST00000302763 DCST2Q5T1A1 773 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 PMS2CLQ68D20 193 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 NUP54Q7Z3B4 507 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 WDR5BQ86VZ2 330 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 DEFB123Q8N688 67 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 PFN4Q8NHR9 129 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 DEDD2Q8WXF8 326 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 SLC35A4Q96G79 324 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 TNFRSF13CQ96RJ3 184 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 SERINC2Q96SA4 455 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 ARHGDIGQ99819 225 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 NRSN2Q9GZP1 204 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 GALNT9Q9HCQ5 603 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 SEMA4GQ9NTN9 838 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 KLRF1Q9NZS2 232 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 MGAT4AQ9UM21 535 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 DTX4Q9Y2E6 619 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 HEATR5AQ86XA9 2040 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 A0A0B4J203 849 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 DCDC2BA2VCK2 349 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 NPIPB9F8W1W9 429 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 H3BML4 177 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 TSPAN9O75954 239 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 SERPINA3P01011 423 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 IGKV1D-16P01601 117 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 CFIP05156 583 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 ACP2P11117 423 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 GTF2F2P13984 249 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 ZNF136P52737 540 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 AP3S2P59780 193 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 EEF1A1P68104 462 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 CTAG1AP78358 180 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 ARFRP1Q13795 201 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 OR1Q1Q15612 314 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 DEFB133Q30KQ1 61 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 CCDC58Q4VC31 144 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 FAM205BPQ63HN1 556 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 ZNF385CQ66K41 422 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 DBX2Q6ZNG2 339 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 SLC35D2Q76EJ3 337 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 UBALD2Q8IYN6 164 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 ELMOD2Q8IZ81 293 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 C19orf47Q8N9M1 422 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 AVL9Q8NBF6 648 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 OR13C5Q8NGS8 318 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 RNASE11Q8TAA1 199 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 TMEM163Q8TC26 289 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 GIMAP1Q8WWP7 306 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 GCDHQ92947 438 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 SGTBQ96EQ0 304 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 S100A16Q96FQ6 103 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 IER2Q9BTL4 223 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 TAPBPLQ9BX59 468 aa6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 MRTO4Q9UKD2 239 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-201ENST00000302763 ZNF670-ZNF695F2Z2N8 137 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 ONECUT2O95948 504 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 MAKP20794 623 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 SRP9P49458 86 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 EPHA4P54764 986 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 PSMA6P60900 246 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 GALK2Q01415 458 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 NSDHLQ15738 373 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 NKPD1Q17RQ9 610 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 TSSK4Q6SA08 328 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 SLC16A12Q6ZSM3 486 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 MRGPREQ86SM8 312 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 ZC3H10Q96K80 434 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 ELF4Q99607 663 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 CMKLR1Q99788 373 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 NKX3-1Q99801 234 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 PDCD1LG2Q9BQ51 273 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 NEURL2Q9BR09 285 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 CCDC32Q9BV29 185 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 DIABLOQ9NR28 239 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 SLC22A11Q9NSA0 550 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 CNOT2Q9NZN8 540 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 MGAT4CQ9UBM8 478 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 FBXO9Q9UK97 447 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 VDAC3Q9Y277 283 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 NOP16Q9Y3C1 178 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 PCDHGB7Q9Y5F8 929 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 MED12Q93074 2177 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 OR5K4A6NMS3 321 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 TACSTD2P09758 323 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 OR8G3PP0DMU2 310 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 RNH1P13489 461 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 PRKXP51817 358 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 PITPNAQ00169 270 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 DUSP5Q16690 384 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 PRAMEF8Q5VWM4 474 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 PRAMEF7Q5VXH5 474 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 COX15Q7KZN9 410 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 PRSS45Q7RTY3 260 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 ZAR1Q86SH2 424 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 BPHLQ86WA6 291 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 SLC35F3Q8IY50 421 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 FTMTQ8N4E7 242 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 ZNF527Q8NB42 609 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 SAP25Q8TEE9 199 aa6.87□□□□□ -1.31
CTNNA1-201ENST00000302763 THAP4Q8WY91 577 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms