RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 OR2G6Q5TZ20 316 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 TSSK4Q6SA08 328 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 RSPO2Q6UXX9 243 aaPredicted RBP16.02■□□□□ 0.16
SHANK1-201ENST00000293441 UBTD2Q8WUN7 234 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 GGHQ92820 318 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 UCN3Q969E3 161 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 ALG12Q9BV10 488 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 NRSN2Q9GZP1 204 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 EPHX3Q9H6B9 360 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 TBCCD1Q9NVR7 557 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 ATG4BQ9Y4P1 393 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 APOC3P02656 99 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 KIAA1024LP59773 190 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 LINC00346Q8IVM7 164 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 SIRT6Q8N6T7 355 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 H1FXQ92522 213 aaKnown RBP16.02■□□□□ 0.16
SHANK1-201ENST00000293441 CNOT2Q9NZN8 540 aaKnown RBP16.02■□□□□ 0.16
SHANK1-201ENST00000293441 MMP17Q9ULZ9 603 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 IGLV3-10A0A075B6K4 115 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 TMEM202A6NGA9 273 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 PRAMEF25A6NGN4 478 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 FAM166BA8MTA8 275 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 CD79BP40259 229 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 VEGFCP49767 419 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 ELP2Q6IA86 826 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 RTL6Q6ICC9 239 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 CGB2Q6NT52 195 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 OR7G1Q8NGA0 311 aa16.02■□□□□ 0.16
SHANK1-201ENST00000293441 ITGBL1O95965 494 aaPredicted RBP16.02■□□□□ 0.15
SHANK1-201ENST00000293441 PAHP00439 452 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 LIM2P55344 173 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 UBE2NLQ5JXB2 153 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 HENMT1Q5T8I9 393 aaKnown RBP16.02■□□□□ 0.15
SHANK1-201ENST00000293441 B3GLCTQ6Y288 498 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 TAAR8Q969N4 342 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 BCL7BQ9BQE9 202 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 FKRPQ9H9S5 495 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 GHRLQ9UBU3 117 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 A0A1B0GUL6 1792 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 SHISA7A6NL88 538 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 GABRPO00591 440 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 CTNSO60931 367 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 TSPAN15O95858 294 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 ALDH3B2P48448 385 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 FAM53CQ9NYF3 392 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 TBC1D29Q9UFV1 150 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 TOGARAM1Q9Y4F4 1720 aa16.02■□□□□ 0.15
SHANK1-201ENST00000293441 NAP1L6A6NFF2 107 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 ABHD16AO95870 558 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 IFNA4P05014 189 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 C21orf33P30042 268 aaPredicted RBP16.01■□□□□ 0.15
SHANK1-201ENST00000293441 SFRP5Q5T4F7 317 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 TMEM174Q8WUU8 243 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 TMEM255BQ8WV15 326 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 SMIM3Q9BZL3 60 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 ZNF286AQ9HBT8 521 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 FGF22Q9HCT0 170 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 OR5K3A6NET4 321 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 SMAD4Q13485 552 aaKnown RBP16.01■□□□□ 0.15
SHANK1-201ENST00000293441 SLC48A1Q6P1K1 146 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 ZNF679Q8IYX0 411 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 DMBX1Q8NFW5 382 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 POC1BQ8TC44 478 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 LHX6Q9UPM6 363 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 PTGER4P35408 488 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 EIF2DP41214 584 aaKnown RBP16.01■□□□□ 0.15
SHANK1-201ENST00000293441 FAM69AQ5T7M9 428 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 GARNL3Q5VVW2 1013 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 SLX4IPQ5VYV7 408 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 C5orf46Q6UWT4 87 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 L3MBTL4Q8NA19 623 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 ZFAND1Q8TCF1 268 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 ZNF355PQ9NSJ1 428 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 EDIL3O43854 480 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 UPK1BO75841 260 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 NMNAT3Q96T66 252 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 C20orf27Q9GZN8 174 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 TUSC2O75896 110 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 CD1CP29017 333 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 WDSUB1Q8N9V3 476 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 HYLS1Q96M11 299 aa16.01■□□□□ 0.15
SHANK1-201ENST00000293441 PRRT4C9JH25 899 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 TNK1Q13470 666 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 METRNLQ641Q3 311 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 MIB2Q96AX9 1013 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 NRAPQ86VF7 1730 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 ITGB2P05107 769 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 PTAFRP25105 342 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 EMX1Q04741 257 aaPredicted RBP16■□□□□ 0.15
SHANK1-201ENST00000293441 GPR176Q14439 515 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 FCRLAQ7L513 359 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 OR2T35Q8NGX2 323 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 TFAP2CQ92754 450 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 FAM234AQ9H0X4 552 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 ZNF814B7Z6K7 855 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 PTTG1O95997 202 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 NPPBP16860 134 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 SLC14A1Q13336 389 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 OR5D18Q8NGL1 313 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 A0A1B0GWA3 101 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms